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小麦(L.)中该基因家族的全基因组鉴定与表达分析。

Genome-wide identification and expression analysis of the gene family in wheat ( L.).

作者信息

Sun Lijing, Lv Liangjie, Zhao Jie, Hu Mengyun, Zhang Yelun, Zhao Yun, Tang Xiaodong, Wang Peinan, Li Qianying, Chen Xiyong, Li Hui, Zhang Yingjun

机构信息

Laboratory of Crop Genetics and Breeding of Hebei, Institute of Cereal and Oil Crops, Hebei Academy of Agriculture and Forestry Sciences, Shijiazhuang, China.

出版信息

Front Plant Sci. 2022 Aug 30;13:1006409. doi: 10.3389/fpls.2022.1006409. eCollection 2022.

Abstract

Cytokinin is an important endogenous hormone in plants performing a wide spectrum of biological roles. The are primary cytokinin response genes, which are important components of the cytokinin signaling pathway and are involved in the regulation of plant growth and development. By analysis of the whole genome sequence of wheat, we identified 20 genes encoding RRAs which were clustered into eight homologous groups. The gene structure, conserved motifs, chromosomal location, and -acting regulatory elements of the were analyzed. Quantitative real-time polymerase chain reaction (qRT-PCR) results showed that the expression levels of most of the increased rapidly on exogenous cytokinin application. Moreover, the family members displayed different expression profiles under the stress treatments of drought, salt, cold, and heat. This study provides valuable insights into the gene family in wheat and promotes the potential application of these genes in wheat genetic improvement.

摘要

细胞分裂素是植物中一种重要的内源激素,发挥着广泛的生物学作用。这些是主要的细胞分裂素响应基因,它们是细胞分裂素信号通路的重要组成部分,参与植物生长发育的调控。通过对小麦全基因组序列的分析,我们鉴定出20个编码RRAs的基因,这些基因被聚类为八个同源组。分析了这些基因的结构、保守基序、染色体定位和顺式作用调控元件。定量实时聚合酶链反应(qRT-PCR)结果表明,大多数这些基因在外源细胞分裂素处理后表达水平迅速增加。此外,这些基因家族成员在干旱、盐、冷和热胁迫处理下表现出不同的表达谱。本研究为小麦中这些基因家族提供了有价值的见解,并促进了这些基因在小麦遗传改良中的潜在应用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7759/9468597/8e0010e3d651/fpls-13-1006409-g001.jpg

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