Wu Yuexuan, Kundu Suprateek, Stevens Jennifer S, Fani Negar, Srivastava Anuj
Department of Statistics, Florida State University, Tallahassee, FL, United States.
Department of Biostatistics, The University of Texas MD Anderson Cancer Center, Houston, TX, United States.
Front Neurosci. 2022 Sep 1;16:954055. doi: 10.3389/fnins.2022.954055. eCollection 2022.
It is well-known that morphological features in the brain undergo changes due to traumatic events and associated disorders such as post-traumatic stress disorder (PTSD). However, existing approaches typically offer group-level comparisons, and there are limited predictive approaches for modeling behavioral outcomes based on brain shape features that can account for heterogeneity in PTSD, which is of paramount interest. We propose a comprehensive shape analysis framework representing brain sub-structures, such as the hippocampus, amygdala, and putamen, as parameterized surfaces and quantifying their shape differences using an elastic shape metric. Under this metric, we compute shape summaries (mean, covariance, PCA) of brain sub-structures and represent individual brain shapes by their principal scores under a shape-PCA basis. These representations are rich enough to allow visualizations of full 3D structures and help understand localized changes. In order to validate the elastic shape analysis, we use the principal components (PCs) to reconstruct the brain structures and perform further evaluation by performing a regression analysis to model PTSD and trauma severity using the brain shapes represented PCs and in conjunction with auxiliary exposure variables. We apply our method to data from the Grady Trauma Project (GTP), where the goal is to predict clinical measures of PTSD. The framework seamlessly integrates accurate morphological features and other clinical covariates to yield superior predictive performance when modeling PTSD outcomes. Compared to vertex-wise analysis and other widely applied shape analysis methods, the elastic shape analysis approach results in considerably higher reconstruction accuracy for the brain shape and reveals significantly greater predictive power. It also helps identify local deformations in brain shapes associated with PTSD severity.
众所周知,大脑的形态特征会因创伤事件以及创伤后应激障碍(PTSD)等相关疾病而发生变化。然而,现有方法通常提供的是组水平的比较,基于大脑形状特征对行为结果进行建模的预测方法有限,而这些特征能够解释PTSD中的异质性,这是至关重要的。我们提出了一个全面的形状分析框架,将海马体、杏仁核和壳核等脑亚结构表示为参数化曲面,并使用弹性形状度量来量化它们的形状差异。在这种度量下,我们计算脑亚结构的形状摘要(均值、协方差、主成分分析),并在形状主成分分析基础上通过其主分数来表示个体大脑形状。这些表示足够丰富,能够实现完整三维结构的可视化,并有助于理解局部变化。为了验证弹性形状分析,我们使用主成分来重建脑结构,并通过进行回归分析来进一步评估,该回归分析使用由主成分表示的大脑形状并结合辅助暴露变量来对PTSD和创伤严重程度进行建模。我们将我们的方法应用于格雷迪创伤项目(GTP)的数据,其目标是预测PTSD的临床指标。当对PTSD结果进行建模时,该框架无缝集成了准确的形态特征和其他临床协变量,以产生卓越的预测性能。与逐顶点分析和其他广泛应用的形状分析方法相比,弹性形状分析方法在大脑形状重建精度方面要高得多,并且显示出显著更强的预测能力。它还有助于识别与PTSD严重程度相关的大脑形状局部变形。