Department of Chemistry, Western Michigan University, Kalamazoo, Michigan 49008, United States.
Biochemistry. 2022 Oct 18;61(20):2182-2187. doi: 10.1021/acs.biochem.2c00472. Epub 2022 Sep 26.
The enzyme nicotine oxidoreductase (NicA2) is a member of the flavoprotein amine oxidase family that uses a cytochrome c protein (CycN) as its oxidant instead of dioxygen, which is the oxidant used by most other members of this enzyme family. We recently identified a potential binding site for CycN on the surface of NicA2 through rigid body docking [. , (8), 102251]. However, this potential binding interface has not been experimentally validated. In this paper, we used unnatural amino acid incorporation to probe the binding interface between NicA2 and CycN. Our results are consistent with a structural model of the NicA2-CycN complex predicted by protein-protein docking and AlphaFold, suggesting that this is the binding site for CycN on NicA2's surface. Based on additional mutagenesis of potentially redox active residues in NicA2, we propose that electron transfer from NicA2's flavin to CycN's heme occurs without the assistance of a protein-derived wire.
酶尼古丁氧化还原酶(NicA2)是黄素蛋白胺氧化酶家族的成员,它使用细胞色素 c 蛋白(CycN)作为氧化剂,而不是大多数其他此类酶家族成员使用的氧。我们最近通过刚性对接[.](8),102251)在 NicA2 的表面上鉴定出 CycN 的潜在结合位点。然而,这个潜在的结合界面尚未经过实验验证。在本文中,我们使用非天然氨基酸掺入来探测 NicA2 和 CycN 之间的结合界面。我们的结果与蛋白质-蛋白质对接和 AlphaFold 预测的 NicA2-CycN 复合物的结构模型一致,表明这是 NicA2 表面上 CycN 的结合位点。基于对 NicA2 中潜在氧化还原活性残基的额外突变,我们提出 NicA2 的黄素向 CycN 的血红素的电子转移不需要蛋白质衍生的导线的辅助。