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中国腾冲地热泉中的基因表达与多样性

gene expression and diversity in geothermal springs of Tengchong, China.

作者信息

Song Zhao-Qi, Wang Li, Liang Feng, Zhou Qingfeng, Pei Dongli, Jiang Hongchen, Li Wen-Jun

机构信息

College of Biology and Food, Shangqiu Normal University, Shangqiu, China.

State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Wuhan, China.

出版信息

Front Microbiol. 2022 Sep 8;13:980924. doi: 10.3389/fmicb.2022.980924. eCollection 2022.

Abstract

Terrestrial hot springs have been suggested to harbor diverse diazotrophic lineages by using DNA-based gene phylogenetic analysis. However, only a small amount of diazotrophs were ever confirmed to perform nitrogen fixation. In order to explore the compositions of active diazotrophic populations in hot springs, the expression and diversity of and 16S rRNA genes were investigated in the sediments of hot springs (pH 4.3-9.1; temperature 34-84°C) in Tengchong, China, by using high-throughput sequencing. The results showed that active diazotrophs were diverse in the studied Tengchong hot springs. The main active diazotrophs in high-temperature hot springs were affiliated with , while those in low-temperature hot springs belonged to and . Such dominance of and of diazotrophs has not been reported in other ecosystems. This suggests that hot springs may harbor unique active diazotrophs in comparison with other type of ecosystems. Furthermore, there were significant differences in the phylogenetic lineages of diazotrophs between hot springs of Tengchong and other regions, indicating that diazotrophs have geographical distribution patterns. Statistical analysis suggests that the expression and distribution of gene were influenced by temperature and concentrations of ammonia and sulfur seem in Tengchong hot springs. These findings avail us to understand element cycling mediated by diazotrophs in hot spring ecosystems.

摘要

通过基于DNA的基因系统发育分析,有人提出陆地温泉中存在多种固氮菌谱系。然而,只有少量固氮菌被证实能进行固氮作用。为了探究温泉中活跃固氮菌群的组成,利用高通量测序技术,对中国腾冲温泉(pH值4.3 - 9.1;温度34 - 84°C)沉积物中的nifH和16S rRNA基因的表达及多样性进行了研究。结果表明,在研究的腾冲温泉中,活跃固氮菌种类多样。高温温泉中的主要活跃固氮菌隶属于Nitrososphaeria,而低温温泉中的主要活跃固氮菌属于Nitrosospira和Nitrosomonas。固氮菌中Nitrososphaeria和Nitrosospira/Nitrosomonas的这种优势在其他生态系统中尚未见报道。这表明与其他类型的生态系统相比,温泉可能含有独特的活跃固氮菌。此外,腾冲温泉与其他地区温泉的固氮菌系统发育谱系存在显著差异,表明固氮菌具有地理分布模式。统计分析表明,nifH基因的表达和分布受腾冲温泉温度以及氨和硫浓度的影响。这些发现有助于我们了解温泉生态系统中固氮菌介导的元素循环。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/80fb/9493357/7c284de070f9/fmicb-13-980924-g001.jpg

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