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中国腾冲地热区两个温泉微生物垫中的细菌和古菌多样性。

Bacterial and archaeal diversity in two hot spring microbial mats from the geothermal region of Tengchong, China.

机构信息

Department of Infection, Immunity and Inflammation, University of Leicester, University Road, Leicester LE1 9HN, UK.

出版信息

Extremophiles. 2012 Jul;16(4):607-18. doi: 10.1007/s00792-012-0460-1. Epub 2012 May 24.

Abstract

We investigated the bacterial and archaeal diversity in two hot spring microbial mats from the geothermal region of Tengchong in the Yunnan Province, China, using direct molecular analyses. The Langpu (LP) laminated mat was found by the side of a boiling pool with temperature of 60-65 °C and a pH of 8.5, while the Tengchong (TC) streamer mat consisted of white streamers in a slightly acidic (pH 6.5) hot pool outflow with a temperature of 72 °C. Four 16S rRNA gene clone libraries were constructed and restriction enzyme analysis of the inserts was used to identify unique sequences and clone frequencies. From almost 200 clones screened, 55 unique sequences were retrieved. Phylogenetic analysis showed that the LP mat consisted of a diverse bacterial population [Cyanobacteria, Chloroflexi, Chlorobia, Nitrospirae, 'Deinococcus-Thermus', Proteobacteria (alpha, beta and delta subdivisions), Firmicutes, Bacteroidetes and Actinobacteria], while the archaeal population was dominated by methanogenic Euryarchaeota and Crenarchaeota. In contrast, the TC streamer mat consisted of a bacterial population dominated by Aquificae, while the archaeal population also contained Korarchaeota as well as Crenarchaeota and methanogenic Euryarchaeota. These mats harboured clone sequences affiliated to unidentified lineages, suggesting that they are a potential source for discovering novel bacteria and archaea.

摘要

我们利用直接分子分析方法,研究了来自中国云南省腾冲地热区的两个温泉微生物垫中的细菌和古菌多样性。朗普(LP)层状垫位于一个温度为 60-65°C、pH 值为 8.5 的沸腾池旁,而腾冲(TC)流垫则由微酸性(pH 值为 6.5)温泉流出物中的白色流构成,温度为 72°C。构建了四个 16S rRNA 基因克隆文库,并对插入片段进行了限制性酶分析,以鉴定独特序列和克隆频率。从将近 200 个筛选出的克隆中,我们获得了 55 个独特序列。系统发育分析表明,LP 垫中存在多样化的细菌种群[蓝藻、绿弯菌门、绿菌门、硝化螺旋菌门、“厚壁菌门-热球菌门”、变形菌门(alpha、beta 和 delta 亚群)、Firmicutes、拟杆菌门和放线菌门],而古菌种群则主要由产甲烷的广古菌和泉古菌组成。相比之下,TC 流垫中的细菌种群主要由泉古菌门组成,而古菌种群还包含 Korarchaeota 以及泉古菌门和产甲烷广古菌。这些垫子中存在与未鉴定谱系相关的克隆序列,表明它们是发现新细菌和古菌的潜在来源。

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