• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

单细胞 RNA 测序揭示干扰素诱导的鸟苷酸结合蛋白与肌肉减少症有关。

Single-cell RNA-seq reveals interferon-induced guanylate-binding proteins are linked with sarcopenia.

机构信息

Department of Orthopedic Surgery, the First People's Hospital of Yunnan Province, the Affiliated Hospital of Kunming University of Science and Technology, the Key Laboratory of Digital Orthopaedics of Yunnan Provincial, Kunming, Yunnan, China.

InnoVec Biotherapeutics Co., Ltd, Beijing, China.

出版信息

J Cachexia Sarcopenia Muscle. 2022 Dec;13(6):2985-2998. doi: 10.1002/jcsm.13091. Epub 2022 Sep 26.

DOI:10.1002/jcsm.13091
PMID:36162807
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9745549/
Abstract

BACKGROUND

Sarcopenia is defined as an age-related progressive loss of muscle mass and/or strength. Although different factors can contribute to this disease, the underlying mechanisms remain unclear. We assessed transcriptional heterogeneity in skeletal muscles from sarcopenic and control mice at single-cell resolution.

METHODS

A mouse model was established to study sarcopenic skeletal muscles. Single-cell RNA-seq was performed on tibialis anterior (TA) muscle cells collected from sarcopenic and control mice. A series of bioinformatic analyses were carried out to identify and compare different cell types under different conditions. Immunofluorescence staining and western blotting were used to validate the findings from single-cell experiments. Tube formation assays were conducted to further evaluate the effects of Gbp2 on endothelial cells during angiogenesis.

RESULTS

A murine sarcopenia model was successfully established using a senescence-accelerated mouse strain (SAMP6, n = 5). Sarcopenia phenotype was induced by administration of dexamethasone (20 mg/kg) and reduced physical activity. Senescence-resistant mice strain (SAMR1) and SAMP6 strain with similar activity but injected with PBS were recruited as two control groups. As signs of sarcopenia, body weight, muscle cell counts and cross-sectional fibre area were all significantly decreased in sarcopenic mice (P value = 0.004, 0.03 and 0.035, respectively). After quality control, 13 612 TA muscle single-cell transcriptomes were retained for analysis. Fourteen cell clusters were identified from the profiled cells. Among them, two distinct endothelial subtypes were found to be dominant in the sarcopenia group (42.2% cells) and in the two control groups (59.1% and 47.9% cells), respectively. 191 differentially expressed genes were detected between the two endothelial subtypes. Sarcopenia-specific endothelial cell subtype exhibited a dramatic increase in the interferon family genes and the interferon-inducible guanylate-binding protein (GBP) family gene expressions. For example, Igtp and Gbp2 in sarcopenic endothelial cells were 5.4 and 13.3 times higher than those in the control groups, respectively. We further validated our findings in muscle specimens of sarcopenia patients and observed that GBP2 levels were increased in endothelial cells of a subset of patients (11 of 40 patients, 27.5%), and we identified significantly higher CD31 and GBP2 co-localization (P value = 0.001128). Finally, we overexpressed Gbp2 in human umbilical vein endothelial cells in vitro. The endothelial cells with elevated Gbp2 expression displayed compromised tube formation.

CONCLUSIONS

Our single-cell-based results suggested that endothelial cells may play critical roles in sarcopenia development through interferon-GBP signalling pathways, highlighting new therapeutic directions to slow down or even reverse age-related sarcopenia.

摘要

背景

肌少症是一种与年龄相关的进行性肌肉质量和/或力量丧失。虽然有许多因素会导致这种疾病,但潜在的机制仍不清楚。我们在单细胞分辨率下评估了来自肌少症和对照小鼠骨骼肌中的转录异质性。

方法

建立了一个小鼠模型来研究肌少症骨骼肌。对来自肌少症和对照小鼠的胫骨前肌(TA)肌细胞进行单细胞 RNA-seq。进行了一系列生物信息学分析,以鉴定和比较不同条件下的不同细胞类型。免疫荧光染色和 Western blot 用于验证单细胞实验的结果。管形成实验用于进一步评估 Gbp2 在血管生成过程中对内皮细胞的影响。

结果

使用衰老加速小鼠品系(SAMP6,n=5)成功建立了一种肌少症小鼠模型。使用地塞米松(20mg/kg)和减少体力活动诱导肌少症表型。选择衰老抗性小鼠品系(SAMR1)和接受 PBS 注射的 SAMP6 品系作为两个对照组。作为肌少症的迹象,肌少症小鼠的体重、肌细胞计数和横截面积纤维均显著降低(P 值=0.004、0.03 和 0.035)。经过质量控制,保留了 13612 个 TA 肌肉单细胞转录组进行分析。从分析的细胞中鉴定出 14 个细胞簇。其中,在肌少症组(42.2%的细胞)和两个对照组(59.1%和 47.9%的细胞)中发现两种不同的内皮亚型占主导地位。在两种内皮亚型之间检测到 191 个差异表达基因。肌少症特异性内皮细胞亚型中干扰素家族基因和干扰素诱导的鸟苷酸结合蛋白(GBP)家族基因表达显著增加。例如,肌少症内皮细胞中的 IgTp 和 Gbp2 分别比对照组高 5.4 倍和 13.3 倍。我们在肌少症患者的肌肉标本中进一步验证了我们的发现,并观察到内皮细胞中一组患者(40 名患者中的 11 名,27.5%)的 GBP2 水平升高,并且我们发现 CD31 和 GBP2 的共定位显著增加(P 值=0.001128)。最后,我们在体外过表达人脐静脉内皮细胞中的 Gbp2。表达升高的 Gbp2 的内皮细胞显示出管形成受损。

结论

我们基于单细胞的结果表明,内皮细胞可能通过干扰素-GBP 信号通路在肌少症发展中发挥关键作用,这突显了减缓甚至逆转与年龄相关的肌少症的新治疗方向。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb8b/9745549/cf1a93999afc/JCSM-13-2985-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb8b/9745549/99d7516e1fbd/JCSM-13-2985-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb8b/9745549/05c9ac4fa73c/JCSM-13-2985-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb8b/9745549/915869c41c37/JCSM-13-2985-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb8b/9745549/05e02144177a/JCSM-13-2985-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb8b/9745549/2e29ba6e97f3/JCSM-13-2985-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb8b/9745549/cf1a93999afc/JCSM-13-2985-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb8b/9745549/99d7516e1fbd/JCSM-13-2985-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb8b/9745549/05c9ac4fa73c/JCSM-13-2985-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb8b/9745549/915869c41c37/JCSM-13-2985-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb8b/9745549/05e02144177a/JCSM-13-2985-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb8b/9745549/2e29ba6e97f3/JCSM-13-2985-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb8b/9745549/cf1a93999afc/JCSM-13-2985-g003.jpg

相似文献

1
Single-cell RNA-seq reveals interferon-induced guanylate-binding proteins are linked with sarcopenia.单细胞 RNA 测序揭示干扰素诱导的鸟苷酸结合蛋白与肌肉减少症有关。
J Cachexia Sarcopenia Muscle. 2022 Dec;13(6):2985-2998. doi: 10.1002/jcsm.13091. Epub 2022 Sep 26.
2
Longitudinal transcriptomic analysis of mouse sciatic nerve reveals pathways associated with age-related muscle pathology.对小鼠坐骨神经的纵向转录组分析揭示了与年龄相关肌肉病变相关的途径。
J Cachexia Sarcopenia Muscle. 2023 Jun;14(3):1322-1336. doi: 10.1002/jcsm.13204. Epub 2023 Mar 10.
3
Characterizing the skeletal muscle immune microenvironment for sarcopenia: insights from transcriptome analysis and histological validation.从转录组分析和组织学验证角度探讨骨骼肌免疫微环境与肌肉减少症的关系
Front Immunol. 2024 Jul 4;15:1414387. doi: 10.3389/fimmu.2024.1414387. eCollection 2024.
4
Impact of physical activity on mitochondrial enzymes, muscle stem cell and anti-oxidant protein Sestrins in Sarcopenic mice.运动对肌少症小鼠线粒体酶、肌肉干细胞和抗氧化蛋白 Sestrins 的影响。
Exp Gerontol. 2021 Jul 15;150:111358. doi: 10.1016/j.exger.2021.111358. Epub 2021 Apr 16.
5
Nutritional status, body composition, and quality of life in community-dwelling sarcopenic and non-sarcopenic older adults: A case-control study.社区居住的肌少症和非肌少症老年人的营养状况、身体成分和生活质量:一项病例对照研究。
Clin Nutr. 2017 Feb;36(1):267-274. doi: 10.1016/j.clnu.2015.11.013. Epub 2015 Nov 27.
6
Combined fibre atrophy and decreased muscle regeneration capacity driven by mitochondrial DNA alterations underlie the development of sarcopenia.线粒体 DNA 改变导致的纤维萎缩和肌肉再生能力下降是导致肌肉减少症发展的基础。
J Cachexia Sarcopenia Muscle. 2022 Aug;13(4):2132-2145. doi: 10.1002/jcsm.13026. Epub 2022 Jun 28.
7
Ovarian cancer ascites induces skeletal muscle wasting in vitro and reflects sarcopenia in patients.卵巢癌腹水在体外诱导骨骼肌减少,并反映在患者的肌肉减少症中。
J Cachexia Sarcopenia Muscle. 2022 Feb;13(1):311-324. doi: 10.1002/jcsm.12885. Epub 2021 Dec 23.
8
Sarcopenia is attenuated by TRB3 knockout in aging mice via the alleviation of atrophy and fibrosis of skeletal muscles.TRB3 基因敲除可减轻衰老小鼠的肌肉萎缩和纤维化,从而改善肌肉减少症。
J Cachexia Sarcopenia Muscle. 2020 Aug;11(4):1104-1120. doi: 10.1002/jcsm.12560. Epub 2020 Feb 25.
9
A unique sarcopenic progression in the mouse rotator cuff.在老鼠的旋转袖中出现一种独特的进行性肌肉减少症。
J Cachexia Sarcopenia Muscle. 2022 Feb;13(1):561-573. doi: 10.1002/jcsm.12808. Epub 2021 Oct 28.
10
Altered gene and protein expressions of vitamin D receptor in skeletal muscle in sarcopenic patients who sustained distal radius fractures.骨骼肌中维生素 D 受体的基因和蛋白表达改变与发生桡骨远端骨折的肌肉减少症患者有关。
J Bone Miner Metab. 2019 Sep;37(5):920-927. doi: 10.1007/s00774-019-00995-0. Epub 2019 Feb 21.

引用本文的文献

1
Decoding aging in the heart via single cell dual omics of non-cardiomyocytes.通过非心肌细胞的单细胞双组学解码心脏衰老
iScience. 2024 Nov 28;27(12):111469. doi: 10.1016/j.isci.2024.111469. eCollection 2024 Dec 20.
2
Transcriptional analysis of cancer cachexia: conserved and unique features across preclinical models and biological sex.癌症恶病质的转录组学分析:临床前模型和生物性别之间的保守和独特特征。
Am J Physiol Cell Physiol. 2024 Dec 1;327(6):C1514-C1531. doi: 10.1152/ajpcell.00647.2024. Epub 2024 Oct 28.
3
Spatiotemporal Analysis of Mesenchymal Stem Cells Fate Determination by Inflammatory Niche Following Soft Tissue Injury at a Single-Cell Level.

本文引用的文献

1
Single nuclei profiling identifies cell specific markers of skeletal muscle aging, frailty, and senescence.单细胞分析鉴定骨骼肌衰老、虚弱和衰老的细胞特异性标志物。
Aging (Albany NY). 2022 Dec 13;14(23):9393-9422. doi: 10.18632/aging.204435.
2
Ethical guidelines for publishing in the Journal of Cachexia, Sarcopenia and Muscle: update 2021.《恶病质、肌肉减少症与肌肉杂志》发表伦理准则:2021年更新版
J Cachexia Sarcopenia Muscle. 2021 Dec;12(6):2259-2261. doi: 10.1002/jcsm.12899. Epub 2021 Dec 13.
3
Mouse models of sarcopenia: classification and evaluation.
单细胞水平下软组织损伤后炎症微环境对间充质干细胞命运决定的时空分析
Adv Sci (Weinh). 2024 Nov;11(43):e2310282. doi: 10.1002/advs.202310282. Epub 2024 Sep 23.
4
Application and research progress of single cell sequencing technology in leukemia.单细胞测序技术在白血病中的应用及研究进展
Front Oncol. 2024 Aug 29;14:1389468. doi: 10.3389/fonc.2024.1389468. eCollection 2024.
5
Diffusion-tensor magnetic resonance imaging as a non-invasive assessment of extracellular matrix remodeling in lumbar paravertebral muscles of rats with sarcopenia.弥散张量磁共振成像作为一种非侵入性的评估方法,用于评估肌少症大鼠腰椎旁肌细胞外基质重塑。
BMC Musculoskelet Disord. 2024 Jul 13;25(1):540. doi: 10.1186/s12891-024-07654-0.
6
Single-Cell RNA Sequencing Reveals the Cellular Landscape of in a Newborn Suhuai Pig.单细胞 RNA 测序揭示了新生苏淮猪 中的细胞图谱。
Int J Mol Sci. 2024 Jan 18;25(2):1204. doi: 10.3390/ijms25021204.
7
Age Is Just a Number: Progress and Obstacles in the Discovery of New Candidate Drugs for Sarcopenia.年龄只是一个数字:肌少症新候选药物发现的进展和障碍。
Cells. 2023 Nov 11;12(22):2608. doi: 10.3390/cells12222608.
8
The time-course of cancer cachexia onset reveals biphasic transcriptional disruptions in female skeletal muscle distinct from males.癌症恶病质发作的时间进程揭示了女性骨骼肌中与男性不同的双相转录扰乱。
BMC Genomics. 2023 Jul 4;24(1):374. doi: 10.1186/s12864-023-09462-7.
肌少症的小鼠模型:分类与评估。
J Cachexia Sarcopenia Muscle. 2021 Jun;12(3):538-554. doi: 10.1002/jcsm.12709. Epub 2021 May 5.
4
Inference and analysis of cell-cell communication using CellChat.使用 CellChat 进行细胞间通讯的推断和分析。
Nat Commun. 2021 Feb 17;12(1):1088. doi: 10.1038/s41467-021-21246-9.
5
Molecular and phenotypic analysis of rodent models reveals conserved and species-specific modulators of human sarcopenia.啮齿动物模型的分子和表型分析揭示了人类肌肉减少症的保守和物种特异性调节因子。
Commun Biol. 2021 Feb 12;4(1):194. doi: 10.1038/s42003-021-01723-z.
6
Osteoclast fusion and bone loss are restricted by interferon inducible guanylate binding proteins.破骨细胞融合和骨质流失受到干扰素诱导的鸟苷酸结合蛋白的限制。
Nat Commun. 2021 Jan 21;12(1):496. doi: 10.1038/s41467-020-20807-8.
7
Prevalence and risk factors of primary sarcopenia in community-dwelling outpatient elderly: a cross-sectional study.社区居住的老年门诊患者原发性肌肉减少症的患病率及危险因素:一项横断面研究。
Sci Rep. 2020 Nov 11;10(1):19551. doi: 10.1038/s41598-020-75250-y.
8
Single-cell analysis uncovers fibroblast heterogeneity and criteria for fibroblast and mural cell identification and discrimination.单细胞分析揭示了成纤维细胞的异质性,以及鉴定和区分成纤维细胞和壁细胞的标准。
Nat Commun. 2020 Aug 7;11(1):3953. doi: 10.1038/s41467-020-17740-1.
9
Age-related decline of interferon-gamma responses in macrophage impairs satellite cell proliferation and regeneration.年龄相关的巨噬细胞干扰素-γ反应下降会损害卫星细胞的增殖和再生。
J Cachexia Sarcopenia Muscle. 2020 Oct;11(5):1291-1305. doi: 10.1002/jcsm.12584. Epub 2020 Jul 29.
10
Brain Endothelial Cells Are Exquisite Sensors of Age-Related Circulatory Cues.脑内皮细胞是与年龄相关的循环线索的敏感传感器。
Cell Rep. 2020 Mar 31;30(13):4418-4432.e4. doi: 10.1016/j.celrep.2020.03.012.