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比较生理学和共表达网络分析揭示了花生潜在的耐旱机制。

Comparative physiological and coexpression network analyses reveal the potential drought tolerance mechanism of peanut.

机构信息

College of Agronomy, Shenyang Agricultural University, Shenyang, China.

出版信息

BMC Plant Biol. 2022 Sep 26;22(1):460. doi: 10.1186/s12870-022-03848-7.

DOI:10.1186/s12870-022-03848-7
PMID:36162997
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9511739/
Abstract

BACKGROUND

Drought stress has negative effects on plant growth and productivity. In this study, a comprehensive analysis of physiological responses and gene expression was performed. The responses and expressions were compared between drought-tolerant (DT) and drought-sensitive (DS) peanut varieties to investigate the regulatory mechanisms and hub genes involved in the impact of drought stress on culture.

RESULTS

The drought-tolerant variety had robust antioxidative capacities with higher total antioxidant capacity and flavonoid contents, and it enhanced osmotic adjustment substance accumulation to adapt to drought conditions. KEGG analysis of differentially expressed genes demonstrated that photosynthesis was strongly affected by drought stress, especially in the drought-sensitive variety, which was consistent with the more severe suppression of photosynthesis. The hub genes in the key modules related to the drought response, including genes encoding protein kinase, E3 ubiquitin-protein ligase, potassium transporter, pentatricopeptide repeat-containing protein, and aspartic proteinase, were identified through a comprehensive combined analysis of genes and physiological traits using weighted gene co-expression network analysis. There were notably differentially expressed genes between the two varieties, suggesting the positive roles of these genes in peanut drought tolerance.

CONCLUSION

A comprehensive analysis of physiological traits and relevant genes was conducted on peanuts with different drought tolerances. The findings revealed diverse drought-response mechanisms and identified candidate genes for further research.

摘要

背景

干旱胁迫对植物的生长和生产力有负面影响。在这项研究中,我们对生理响应和基因表达进行了全面分析。我们比较了耐旱(DT)和干旱敏感(DS)花生品种之间的响应和表达,以研究干旱胁迫对培养物的影响所涉及的调节机制和关键基因。

结果

耐旱品种具有强大的抗氧化能力,具有更高的总抗氧化能力和类黄酮含量,并增强了渗透调节物质的积累以适应干旱条件。差异表达基因的 KEGG 分析表明,光合作用强烈受到干旱胁迫的影响,特别是在干旱敏感品种中,这与光合作用的抑制更为严重一致。通过加权基因共表达网络分析对基因和生理特性进行综合联合分析,确定了与干旱响应相关的关键模块中的关键基因,包括编码蛋白激酶、E3 泛素蛋白连接酶、钾转运蛋白、五肽重复蛋白和天冬氨酸蛋白酶的基因。两个品种之间存在明显差异表达的基因,表明这些基因在花生耐旱性中发挥积极作用。

结论

我们对具有不同耐旱性的花生进行了生理特性和相关基因的综合分析。研究结果揭示了不同的干旱响应机制,并确定了候选基因,以供进一步研究。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f3fc/9511739/10fcc0508e74/12870_2022_3848_Fig9_HTML.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f3fc/9511739/13cbeb01e78f/12870_2022_3848_Fig5_HTML.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f3fc/9511739/981853e8c6d8/12870_2022_3848_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f3fc/9511739/c42b43c294f4/12870_2022_3848_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f3fc/9511739/10fcc0508e74/12870_2022_3848_Fig9_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f3fc/9511739/38a6b70c0f22/12870_2022_3848_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f3fc/9511739/9a0613407a56/12870_2022_3848_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f3fc/9511739/1ebb7c4398fc/12870_2022_3848_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f3fc/9511739/4a42b4ed9a19/12870_2022_3848_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f3fc/9511739/13cbeb01e78f/12870_2022_3848_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f3fc/9511739/be595b42424e/12870_2022_3848_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f3fc/9511739/981853e8c6d8/12870_2022_3848_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f3fc/9511739/c42b43c294f4/12870_2022_3848_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f3fc/9511739/10fcc0508e74/12870_2022_3848_Fig9_HTML.jpg

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