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从眼影化妆品中分离的芽孢杆菌 3A ES 的全基因组特征分析

Genomic characterization of Bacillus cereus sensu stricto 3A ES isolated from eye shadow cosmetic products.

机构信息

Office of Regulatory Science, FDA, College Park, MD, 20740, USA.

出版信息

BMC Microbiol. 2022 Oct 5;22(1):240. doi: 10.1186/s12866-022-02652-5.

Abstract

BACKGROUND

The Bacillus cereus group, also known as B. cereus sensu lato (s.l.) contains ubiquitous spore-forming bacteria found in the environment including strains from the B. cereus sensu stricto (s.s.) species. They occur naturally in a wide range of raw materials and in consumer products. Characterizing isolates that have survived in consumer products allows us to better understand the mechanisms that permit spores to persist and potentially cause illness. Here we characterize the draft genome sequence of B. cereus s. s. 3A-ES, originally isolated from eye shadow and since investigated in several cosmetic studies and compared it to other top ten published complete genome sequences of B. cereus s.l. members.

RESULTS

The draft genome sequence of B. cereus s.s. 3A ES consisted of an average of 90 contigs comprising approximately 5,335,727 bp and a GC content of 34,988%, and with 5509 predicted coding sequences. Based on the annotation statistics and comparison to other genomes within the same species archived in the Pathosystems Resource Integration Center (PATRIC), this genome "was of good quality. Annotation of B. cereus s.s. 3A ES revealed a variety of subsystem features, virulence factors and antibiotic resistant genes. The phylogenetic analysis of ten B. cereus group members showed B. cereus s.s. 3A-ES to be a closely related homolog of B. cereus s.s. ATCC 14,579, an established reference strain that is not adapted for cosmetic microbiological studies. Survival of 3A-ES in eye shadow could be linked to predicted stress-response genes and strengthened by additional stress-response genes such as VanB-type, VanRB, CAT15/16, BcrA, BcrB, Lsa(B), and recA that are lacking in B. cereus s.s. ATCC 14,579.

CONCLUSION

Our genomic analysis of B. cereus s.s. 3A-ES revealed genes, which may allow this bacterium to withstand the action of preservatives and inhibitors in cosmetics, as well as virulence factors that could contribute to its pathogenicity. Having a well-characterized strain obtained from eye-shadow may be useful for establishing a reference strain for cosmetics testing.

摘要

背景

芽孢杆菌属,也称为 B. cereus sensu lato(s.l.),包含存在于环境中的无处不在的产芽孢细菌,包括来自 B. cereus sensu stricto(s.s.)物种的菌株。它们自然存在于各种原材料和消费品中。对在消费品中存活下来的分离株进行特征描述,可以帮助我们更好地了解允许孢子存活并可能导致疾病的机制。在这里,我们对最初从眼影中分离出的 B. cereus s.s. 3A-ES 的草图基因组序列进行了特征描述,并对其进行了研究,之后在几项化妆品研究中进行了调查,并将其与其他十种已公布的芽孢杆菌属 s.l.成员的完整基因组序列进行了比较。

结果

B. cereus s.s. 3A ES 的草图基因组序列由平均 90 个序列组成,包含约 5,335,727 bp,GC 含量为 34.988%,预测有 5509 个编码序列。根据注释统计数据和与 PATRIC 中存档的同一物种的其他基因组的比较,该基因组“质量良好”。对 B. cereus s.s. 3A ES 的注释揭示了各种子系统特征、毒力因子和抗生素抗性基因。对十种芽孢杆菌属成员的系统发育分析表明,B. cereus s.s. 3A-ES 是 B. cereus s.s. ATCC 14,579 的密切同源物,ATCC 14,579 是一种已建立的参考菌株,不适合化妆品微生物学研究。3A-ES 在眼影中的存活可能与预测的应激反应基因有关,并通过 VanB 型、VanRB、CAT15/16、BcrA、BcrB、Lsa(B) 和 recA 等额外的应激反应基因得到加强,而这些基因在 B. cereus s.s. ATCC 14,579 中缺失。

结论

我们对 B. cereus s.s. 3A-ES 的基因组分析揭示了一些基因,这些基因可能使该细菌能够耐受化妆品中的防腐剂和抑制剂的作用,以及可能导致其致病性的毒力因子。获得一种来自眼影的特征良好的菌株可能对建立化妆品测试的参考菌株有用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a0cb/9533521/a3a5f016750a/12866_2022_2652_Fig1_HTML.jpg

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