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抗 COVID-19 病毒蛋白和分子对接:从 Blume 中提取的各种抗病毒化合物的特性研究。

Antiviral COVID-19 protein and molecular docking: characterization of various antiviral compounds extracted from Blume.

机构信息

Department of Plant Sciences, Quaid-i-Azam University, Islamabad, Pakistan.

Member, Pakistan Academy of Sciences, Islamabad, Pakistan.

出版信息

Front Public Health. 2022 Sep 23;10:964741. doi: 10.3389/fpubh.2022.964741. eCollection 2022.

Abstract

Blume is a highly medicinal and poisonous plant belong to the family Araceae. It is used to treat several deadly diseases, including viral infections. It has antioxidant, anti-cancerous, antimalarial, anti-vermicidal, and antiviral activities. Therefore, five parts of the Blume plant, such as leaf, seed, stem, pulp, and rhizome extract, were evaluated for metabolic and characterization of probable compounds using gas chromatography-mass spectrometry (GC-MS) analysis. A total of 22 compounds were isolated from the methanolic extracts of Blume. A selected antiviral COVID-19 protein i.e., protease (6LU7) was docked against the obtained compounds. Different affinities were obtained through various compounds. The best results were shown by three different compounds identified in the rhizome. The maximum binding affinity of these compounds is 8.1 kJ/mol. Molecular docking (MD) indicate that these molecules have the highest binding energies and hydrogen bonding interactions. The binding mode of interaction was discovered to be reasonably effective for counteracting the SARS virus COVID-19. The findings of this study could be extremely useful in the development of more phytochemical-based COVID-19 therapeutics.

摘要

Blume 是天南星科的一种高度药用和有毒植物。它被用于治疗包括病毒感染在内的多种致命疾病。它具有抗氧化、抗癌、抗疟、抗蠕虫和抗病毒活性。因此,评估了 Blume 植物的五个部分,如叶、种子、茎、果肉和根茎提取物,使用气相色谱-质谱联用 (GC-MS) 分析对其代谢物和可能化合物进行了表征。从 Blume 的甲醇提取物中分离出 22 种化合物。选择了一种抗病毒 COVID-19 蛋白,即蛋白酶 (6LU7),对获得的化合物进行对接。不同的化合物得到了不同的亲和力。根茎中鉴定出的三种不同化合物表现出最好的结果。这些化合物的最大结合亲和力为 8.1kJ/mol。分子对接 (MD) 表明,这些分子具有最高的结合能和氢键相互作用。发现这种相互作用的结合模式对对抗 SARS 病毒 COVID-19 非常有效。本研究的结果对于开发更多基于植物化学物质的 COVID-19 疗法可能非常有用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6dc6/9540392/4d3bf2fe7c00/fpubh-10-964741-g0001.jpg

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