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优化后的RTT碱基编辑可校正该基因中的c.8713C>T突变。

Prime editing optimized RTT permits the correction of the c.8713C>T mutation in gene.

作者信息

Happi Mbakam Cedric, Rousseau Joel, Lu Yaoyao, Bigot Anne, Mamchaoui Kamel, Mouly Vincent, Tremblay Jacques P

机构信息

CHU de Québec Research Centre, Laval University, Québec, QC G1V 0A6, Canada.

Molecular Medicine Department, Faculty of Medicine, Laval University, Québec, QC G1V 4G2, Canada.

出版信息

Mol Ther Nucleic Acids. 2022 Oct 2;30:272-285. doi: 10.1016/j.omtn.2022.09.022. eCollection 2022 Dec 13.

Abstract

Duchenne muscular dystrophy is a severe debilitating genetic disease caused by different mutations in the gene leading to the absence of dystrophin protein under the sarcolemma. We used CRISPR-Cas9 prime editing technology for correction of the c.8713C>T mutation in the gene and tested different variations of reverse transcription template (RTT) sequences. We increased by 3.8-fold the editing percentage of the target nucleotide located at +13. A modification of the protospacer adjacent motif sequence (located at +6) and a silent mutation (located at +9) were also simultaneously added to the target sequence modification. We observed significant differences in editing efficiency in interconversion of different nucleotides and the distance between the target, the nicking site, and the additional mutations. We achieved 22% modifications in myoblasts of a DMD patient, which led to dystrophin expression detected by western blot in the myotubes that they formed. RTT optimization permitted us to improve the prime editing of a point mutation located at +13 nucleotides from the nick site to restore dystrophin protein.

摘要

杜氏肌营养不良症是一种严重的致残性遗传疾病,由基因中的不同突变引起,导致肌膜下抗肌萎缩蛋白缺失。我们使用CRISPR-Cas9碱基编辑技术校正基因中的c.8713C>T突变,并测试了逆转录模板(RTT)序列的不同变体。我们将位于+13的目标核苷酸的编辑百分比提高了3.8倍。同时,还将原间隔相邻基序序列(位于+6)的修饰和沉默突变(位于+9)添加到目标序列修饰中。我们观察到在不同核苷酸的相互转换以及目标、切口位点和额外突变之间的距离方面,编辑效率存在显著差异。我们在一名杜氏肌营养不良症患者的成肌细胞中实现了22%的修饰,这导致通过蛋白质免疫印迹法在它们形成的肌管中检测到抗肌萎缩蛋白表达。RTT优化使我们能够改善位于距切口位点+13个核苷酸处的点突变的碱基编辑,以恢复抗肌萎缩蛋白。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/450b/9587501/61e03b8269d7/fx1.jpg

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