Zhao Jinfeng, Ma Yan, Yong Kaicheng, Zhu Min, Wang Yueqi, Luo Zhaowei, Wei Xin, Huang Xuehui
College of Information, Mechanical and Electrical Engineering, Shanghai Normal University, Shanghai, China.
Shanghai Key Laboratory of Plant Molecular Sciences, College of Life Sciences, Shanghai Normal University, Shanghai, China.
J Sci Food Agric. 2023 Mar 15;103(4):1912-1924. doi: 10.1002/jsfa.12318. Epub 2022 Nov 24.
Rice is an important food crop plant in the world and is also a model plant for genetics and breeding research. The germination rate is an important indicator that measures the performance of rice seeds. Currently, solutions involving image processing techniques have substantial challenges in the identification of seed germination. The detection of rice seed germination without human intervention involves challenges because the rice seeds are small and densely distributed.
In this article, we develop a convolutional neural network (YOLO-r) that can detect the germination status of rice seeds and automatically evaluate the total number of germinations. Image partition, the Transformer encoder, a small target detection layer, and CDIoU loss are exploited in YOLO-r to improve the detection accuracy. A total of 21 429 seeds were collected, which have different phenotypic characteristics in length, shape, and color. The results show that the mean average precision of YOLO-r is 0.9539, which is higher than the compared models. Moreover, the average detection time per image of YOLO-r was 0.011 s, which meets the real-time requirements. The experimental results demonstrate that YOLO-r is robust to complex situations such as water stains, impurities, awns, adhesion, and so on. The results also show that the mean absolute error of the predicted germination rate mainly exists within 0.1.
Numerous experimental studies have demonstrated that YOLO-r can predict rice germination rate in a fast, easy, and accurate manner. © 2022 Society of Chemical Industry.
水稻是世界上重要的粮食作物,也是遗传学和育种研究的模式植物。发芽率是衡量水稻种子性能的重要指标。目前,涉及图像处理技术的解决方案在种子发芽识别方面存在重大挑战。在无人干预的情况下检测水稻种子发芽具有挑战性,因为水稻种子体积小且分布密集。
在本文中,我们开发了一种卷积神经网络(YOLO-r),它可以检测水稻种子的发芽状态并自动评估发芽总数。YOLO-r中采用了图像分割、Transformer编码器、小目标检测层和CIoU损失来提高检测精度。总共收集了21429颗种子,它们在长度、形状和颜色方面具有不同的表型特征。结果表明,YOLO-r的平均精度均值为0.9539,高于所比较的模型。此外,YOLO-r每张图像的平均检测时间为0.011秒,满足实时要求。实验结果表明,YOLO-r对水渍、杂质、芒、粘连等复杂情况具有鲁棒性。结果还表明,预测发芽率的平均绝对误差主要在0.1以内。
大量实验研究表明,YOLO-r能够快速、简便且准确地预测水稻发芽率。© 2022化学工业协会。