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高密度群体胁迫下[具体物种或对象未明确]相变的表型与差异基因表达分析

Phenotypic and Differential Gene Expression Analyses of Phase Transition in under High-Density Population Stress.

作者信息

Guo Na, Ma Hongyue, Han Haibin, Yan Feng, Gao Haiyan, Zhang Yuanyuan, Gao Shujing

机构信息

Institute of Grassland Research, Chinese Academy of Agricultural Science, Hohhot 010010, China.

Inner Mongolia University for Nationalities, Tongliao 028000, China.

出版信息

Insects. 2022 Nov 8;13(11):1034. doi: 10.3390/insects13111034.

Abstract

The high-density-dependent phase change from solitary to gregarious individuals in locusts is a typical example of phenotypic plasticity. However, the underlying molecular mechanism is not clear. In this study, first, were treated with high-density population stress and then analyzed by Illumina sequencing on days 1, 3, 5, and 7 of the body color change to identify the stage-specific differentially expressed genes (DEGs). The KEGG pathway enrichment analysis of the identified DEGs revealed their role in metabolic pathways. Furthermore, the expression patterns of the nine key DEGs were studied in detail; this showed that the material change in locusts began on the third day of the high-density treatment, with the number of DEGs being the largest, indicating the importance of this period in the phase transition. In addition, the phenotypic change involved several key genes of important regulatory pathways, possibly working in a complex network. Phenotypic plasticity in locusts is multifactorial, involving multilevel material network interactions. This study improves the mechanistic understanding of phenotypic variation in insects at the genetic level.

摘要

蝗虫从独居个体到群居个体的高密度依赖性相变是表型可塑性的一个典型例子。然而,其潜在的分子机制尚不清楚。在本研究中,首先对蝗虫进行高密度种群应激处理,然后在体色变化的第1、3、5和7天通过Illumina测序进行分析,以鉴定阶段特异性差异表达基因(DEG)。对鉴定出的DEG进行KEGG通路富集分析,揭示了它们在代谢途径中的作用。此外,还详细研究了9个关键DEG的表达模式;结果表明,蝗虫的物质变化在高密度处理的第三天开始,此时DEG的数量最多,表明这一时期在相变过程中的重要性。此外,表型变化涉及重要调控途径的几个关键基因,可能在一个复杂的网络中起作用。蝗虫的表型可塑性是多因素的,涉及多层次的物质网络相互作用。本研究在基因水平上提高了对昆虫表型变异机制的理解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0cec/9697361/d1d945e7f3cf/insects-13-01034-g001.jpg

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