Department of Microbiology and Immunology, The University of British Columbia, 2350 Health Sciences Mall, Vancouver, BC V6T 1Z3, Canada.
Genes (Basel). 2022 Nov 9;13(11):2071. doi: 10.3390/genes13112071.
produces a bacteriophage-like particle called the gene transfer agent (RcGTA) that mediates horizontal gene transfer. RcGTA particles transfer random ~4.5-kb fragments of genomic DNA that integrate into recipient genomes by allelic replacement. This work addresses the effect of sub-inhibitory concentrations of antibiotics on gene transfer by RcGTA. A transduction assay was developed to test the effects of various substances on gene transfer. Using this assay, low concentrations of DNA gyrase inhibitors were found to increase the frequency of gene transfer. Novobiocin was studied in more detail, and it was found that this antibiotic did not influence the production or release of RcGTA but instead appeared to act on the recipient cells. The target of novobiocin in other species has been shown to be the GyrB subunit of DNA gyrase (a heterotetramer of 2GyrA and 2GyrB). encodes GyrA and GyrB homologues, and a GyrB overexpression plasmid was created and found to confer resistance to novobiocin. The presence of the overexpression plasmid in recipient cells greatly diminished the novobiocin-mediated increase in gene transfer, confirming that this effect is due to the binding of novobiocin by GyrB. The results of this work show that antibiotics affect gene transfer in and may be relevant to microbial genetic exchange in natural ecosystems.
产生一种类似于噬菌体的颗粒,称为基因转移剂(RcGTA),介导水平基因转移。RcGTA 颗粒转移随机的~4.5kb 基因组 DNA 片段,通过等位基因替换整合到受体基因组中。这项工作研究了亚抑菌浓度的抗生素对 RcGTA 基因转移的影响。开发了一种转导测定法来测试各种物质对基因转移的影响。使用该测定法,发现低浓度的 DNA 拓扑异构酶抑制剂可以增加基因转移的频率。对新生霉素进行了更详细的研究,发现这种抗生素不会影响 RcGTA 的产生或释放,而是似乎作用于受体细胞。其他物种中新生霉素的靶标已被证明是 DNA 拓扑异构酶的 GyrB 亚基(由 2 个 GyrA 和 2 个 GyrB 组成的杂四聚体)。 编码 GyrA 和 GyrB 同源物,并创建了一个 GyrB 过表达质粒,并发现它赋予了对新生霉素的抗性。受体细胞中过表达质粒的存在大大降低了新生霉素介导的基因转移增加,证实这种效应是由于 GyrB 与新生霉素的结合。这项工作的结果表明,抗生素会影响 和 中的基因转移,并且可能与自然生态系统中的微生物遗传交换有关。