• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

基于 SARS-CoV-2 抑制活性的 新型代谢产物的全面计算机研究。

A Comprehensive In Silico Study of New Metabolites from with SARS-CoV-2 Inhibitory Activity.

机构信息

Department of Pharmacognosy, Faculty of Pharmacy, Al-Azhar University, Assiut 71524, Egypt.

Department of Pharmacognosy and Pharmaceutical Chemistry, College of Pharmacy, Taibah University, Al Madinah Al Munawarah 41477, Saudi Arabia.

出版信息

Molecules. 2022 Oct 29;27(21):7369. doi: 10.3390/molecules27217369.

DOI:10.3390/molecules27217369
PMID:36364194
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9657797/
Abstract

Chemical investigation of the total extract of the Egyptian soft coral , led to the isolation of eight compounds, including two new metabolites, sesquiterpene fusceterpene A () and a sterol fuscesterol A (), along with six known compounds. The structures of - were elucidated via intensive studies of their 1D, 2D-NMR, and HR-MS analyses, as well as a comparison of their spectral data with those mentioned in the literature. Subsequent comprehensive in-silico-based investigations against almost all viral proteins, including those of the new variants, e.g., Omicron, revealed the most probable target for these isolated compounds, which was found to be M. Additionally, the dynamic modes of interaction of the putatively active compounds were highlighted, depending on 50-ns-long MDS. In conclusion, the structural information provided in the current investigation highlights the antiviral potential of metabolites with 3,5,6-trihydroxy steroids with different nuclei against SARS-CoV-2, including newly widespread variants.

摘要

对埃及软珊瑚总提取物的化学研究,分离得到了 8 种化合物,包括两种新的代谢产物,倍半萜 fusceterpene A () 和甾醇 fuscesterol A (),以及 6 种已知化合物。通过对 1D、2D-NMR 和 HR-MS 分析以及与文献中提到的光谱数据的比较,对 - 的结构进行了深入研究。随后,针对几乎所有病毒蛋白(包括新型变体,例如奥密克戎)的全面基于计算机的综合研究,揭示了这些分离化合物最可能的靶标,即 M。此外,根据 50-ns 长 MDS 强调了推定活性化合物的动态相互作用模式。总之,当前研究中提供的结构信息突出了具有不同核的 3、5、6-三羟基甾体代谢物对 SARS-CoV-2 的抗病毒潜力,包括新广泛传播的变体。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b4bf/9657797/6e719af71d75/molecules-27-07369-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b4bf/9657797/2b8621b3dd6e/molecules-27-07369-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b4bf/9657797/d0d68fdfa39b/molecules-27-07369-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b4bf/9657797/7fe7575311de/molecules-27-07369-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b4bf/9657797/44bd55c95c39/molecules-27-07369-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b4bf/9657797/3a61ba262fdd/molecules-27-07369-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b4bf/9657797/6e719af71d75/molecules-27-07369-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b4bf/9657797/2b8621b3dd6e/molecules-27-07369-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b4bf/9657797/d0d68fdfa39b/molecules-27-07369-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b4bf/9657797/7fe7575311de/molecules-27-07369-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b4bf/9657797/44bd55c95c39/molecules-27-07369-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b4bf/9657797/3a61ba262fdd/molecules-27-07369-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b4bf/9657797/6e719af71d75/molecules-27-07369-g006.jpg

相似文献

1
A Comprehensive In Silico Study of New Metabolites from with SARS-CoV-2 Inhibitory Activity.基于 SARS-CoV-2 抑制活性的 新型代谢产物的全面计算机研究。
Molecules. 2022 Oct 29;27(21):7369. doi: 10.3390/molecules27217369.
2
Two new polyhydroxylated steroids from Egyptian soft coral (Fam.; Xeniidae).两种新的多羟基甾醇来自埃及软珊瑚(科; Xeniidae)。
Nat Prod Res. 2021 Jan;35(2):236-243. doi: 10.1080/14786419.2019.1624958. Epub 2019 Jun 6.
3
Natural metabolites from the soft coral sp. as potential SARS-CoV-2 main protease inhibitors.来自软珊瑚物种的天然代谢产物作为潜在的SARS-CoV-2主要蛋白酶抑制剂。
Nat Prod Res. 2022 Jun;36(11):2893-2896. doi: 10.1080/14786419.2021.1925892. Epub 2021 May 23.
4
A new gorgostane derivative from the Egyptian Red Sea soft coral Heteroxenia ghardaqensis.一种来自埃及红海软珊瑚 Heteroxenia ghardaqensis 的新戈尔戈烷衍生物。
Nat Prod Res. 2013;27(14):1250-4. doi: 10.1080/14786419.2012.724417. Epub 2012 Sep 12.
5
Anticoagulants as Potential SARS-CoV-2 M Inhibitors for COVID-19 Patients: In Vitro, Molecular Docking, Molecular Dynamics, DFT, and SAR Studies.抗凝剂作为 COVID-19 患者 SARS-CoV-2 M 抑制剂的潜力:体外、分子对接、分子动力学、DFT 和 SAR 研究。
Int J Mol Sci. 2022 Oct 13;23(20):12235. doi: 10.3390/ijms232012235.
6
A Multistage In Silico Study of Natural Potential Inhibitors Targeting SARS-CoV-2 Main Protease.针对 SARS-CoV-2 主蛋白酶的天然潜在抑制剂的多阶段计算机研究。
Int J Mol Sci. 2022 Jul 29;23(15):8407. doi: 10.3390/ijms23158407.
7
Withanone from Attenuates SARS-CoV-2 RBD and Host ACE2 Interactions to Rescue Spike Protein Induced Pathologies in Humanized Zebrafish Model.Withanone 抑制 SARS-CoV-2 RBD 与宿主 ACE2 的相互作用,挽救人源化斑马鱼模型中 Spike 蛋白诱导的病理损伤。
Drug Des Devel Ther. 2021 Mar 11;15:1111-1133. doi: 10.2147/DDDT.S292805. eCollection 2021.
8
Structure-based virtual screening, in silico docking, ADME properties prediction and molecular dynamics studies for the identification of potential inhibitors against SARS-CoV-2 M.基于结构的虚拟筛选、计算机对接、ADME 性质预测和分子动力学研究,以鉴定针对 SARS-CoV-2 M 的潜在抑制剂。
Mol Divers. 2022 Jun;26(3):1645-1661. doi: 10.1007/s11030-021-10298-0. Epub 2021 Sep 4.
9
Synthetic flavonoids as potential antiviral agents against SARS-CoV-2 main protease.合成类黄酮作为抗 SARS-CoV-2 主蛋白酶的潜在抗病毒药物。
J Biomol Struct Dyn. 2022 May;40(8):3777-3788. doi: 10.1080/07391102.2020.1850359. Epub 2020 Nov 30.
10
Synthesis and In Silico Docking Study towards M-Pro of Novel Heterocyclic Compounds Derived from Pyrazolopyrimidinone as Putative SARS-CoV-2 Inhibitors.新型吡唑并嘧啶酮杂环化合物 M 前体的合成及计算机对接研究作为潜在的 SARS-CoV-2 抑制剂。
Molecules. 2022 Aug 19;27(16):5303. doi: 10.3390/molecules27165303.

引用本文的文献

1
Antimicrobial activities of Diltiazem Hydrochloride: drug repurposing approach.盐酸地尔硫䓬的抗菌活性:药物再利用方法。
PeerJ. 2024 Sep 23;12:e17809. doi: 10.7717/peerj.17809. eCollection 2024.
2
Exploring the volatile metabolites of three species: Comparative headspace GC-MS, multivariate chemometrics, chemotaxonomic significance, and anti-SARS-CoV-2 potential.探索三种物种的挥发性代谢产物:比较顶空气相色谱-质谱联用、多元化学计量学、化学分类学意义及抗SARS-CoV-2潜力
Saudi Pharm J. 2023 May;31(5):706-726. doi: 10.1016/j.jsps.2023.03.012. Epub 2023 Mar 22.

本文引用的文献

1
Diagnostic Laboratory Characteristics of COVID-19 Patients Infected by Fomites: COVID-19 Outbreak in a South Korean Public Administrative Facility.受污染物感染的新冠肺炎患者的诊断实验室特征:韩国一个公共行政设施中的新冠肺炎疫情
Pathogens. 2022 Jun 17;11(6):700. doi: 10.3390/pathogens11060700.
2
An perception for newly isolated flavonoids from peach fruit as privileged avenue for a countermeasure outbreak of COVID-19.对桃果实中新分离的黄酮类化合物作为应对COVID-19爆发对策的优先途径的一种认识。
RSC Adv. 2020 Aug 13;10(50):29983-29998. doi: 10.1039/d0ra05265e. eCollection 2020 Aug 10.
3
Four bioactive new steroids from the soft coral collected in South China Sea.
从中国南海采集的软珊瑚中提取的四种具有生物活性的新甾体化合物。
Beilstein J Org Chem. 2022 Apr 8;18:374-380. doi: 10.3762/bjoc.18.42. eCollection 2022.
4
Characterization, in-silico, and in-vitro study of a new steroid derivative from Ophiocoma dentata as a potential treatment for COVID-19.从 Ophiocoma dentata 中提取一种新型甾体衍生物的特性、计算机模拟和体外研究,作为治疗 COVID-19 的潜在药物。
Sci Rep. 2022 Apr 7;12(1):5846. doi: 10.1038/s41598-022-09809-2.
5
Neoechinulin A as a Promising SARS-CoV-2 M Inhibitor: In Vitro and In Silico Study Showing the Ability of Simulations in Discerning Active from Inactive Enzyme Inhibitors.新型棘白菌素 A 作为一种有前途的 SARS-CoV-2 M 抑制剂:体外和计算机模拟研究表明,模拟能够区分活性和非活性酶抑制剂。
Mar Drugs. 2022 Feb 24;20(3):163. doi: 10.3390/md20030163.
6
RNAi-mediated siRNA sequences to combat the COVID-19 pandemic with the inhibition of SARS-CoV2.通过抑制严重急性呼吸综合征冠状病毒2(SARS-CoV2),利用RNA干扰介导的小干扰RNA(siRNA)序列来抗击2019冠状病毒病疫情。
Gene Rep. 2022 Mar;26:101512. doi: 10.1016/j.genrep.2022.101512. Epub 2022 Jan 15.
7
Structural diversity of bioactive steroid compounds isolated from soft corals in the period 2015-2020.2015年至2020年期间从软珊瑚中分离出的生物活性甾体化合物的结构多样性。
J Steroid Biochem Mol Biol. 2022 Apr;218:106061. doi: 10.1016/j.jsbmb.2022.106061. Epub 2022 Jan 11.
8
Editorial: Current Status of Oral Antiviral Drug Treatments for SARS-CoV-2 Infection in Non-Hospitalized Patients.社论:非住院患者 SARS-CoV-2 感染的口服抗病毒药物治疗现状。
Med Sci Monit. 2022 Jan 1;28:e935952. doi: 10.12659/MSM.935952.
9
Cytotoxicity and chemical profiling of the Red Sea soft corals .红海软珊瑚的细胞毒性与化学剖析
Nat Prod Res. 2022 Aug;36(16):4261-4265. doi: 10.1080/14786419.2021.1974437. Epub 2021 Dec 29.
10
High-Throughput Virtual Screening and Validation of a SARS-CoV-2 Main Protease Noncovalent Inhibitor.高通量虚拟筛选和 SARS-CoV-2 主蛋白酶非共价抑制剂的验证。
J Chem Inf Model. 2022 Jan 10;62(1):116-128. doi: 10.1021/acs.jcim.1c00851. Epub 2021 Nov 18.