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一举三得:同一晶体结构中同时存在 I⋯N、I⋯O 和 I⋯π 卤键。

Three for the Price of One: Concomitant I⋯N, I⋯O, and I⋯π Halogen Bonds in the Same Crystal Structure.

机构信息

Institute of Inorganic Chemistry, RWTH Aachen University, Landoltweg 1, 52074 Aachen, Germany.

Key Laboratory of Chemical Biology and Molecular Engineering of the Education Ministry, Shanxi University, 92 Wucheng Road, Taiyuan 030006, China.

出版信息

Molecules. 2022 Nov 3;27(21):7550. doi: 10.3390/molecules27217550.

Abstract

The ditopic molecule 3-(1,3,5-trimethyl-1-4-pyrazolyl)pentane-2,4-dione (HacacMePz) combines two different Lewis basic sites. It forms a crystalline adduct with the popular halogen bond (XB) donor 2,3,5,6-tetrafluoro-1,4-diiodobenzene (TFDIB) with a HacacMePz:TFDIB ratio of 2:3. In a simplified picture, the topology of the adduct corresponds to a net. In addition to the expected acetylacetone keto O and pyrazole N acceptor sites, a third and less common short contact to a TFDIB iodine is observed: The acceptor site is again the most electron-rich site of the pyrazole π-system. This iminic N atom is thus engaged as the acceptor in two orthogonal halogen bonds. Evaluation of the geometric results and of a single-point calculation agree with respect to the strength of the intermolecular contacts: The conventional N⋯I XB is the shortest (2.909(4) Å) and associated with the highest electron density (0.150 Å-3) in the bond critical point (BCP), followed by the O⋯I contact (2.929(3) Å, 0.109 Å-3), and the π contact (3.2157(3) Å, 0.075 Å-3). If one accepts the idea of deducing interaction energies from energy densities at the BCP, the short contacts also follow this sequence. Two more criteria identify the short N⋯I contact as the most relevant: The associated C-I bond is significantly longer than the database average, and it is the only intermolecular interaction with a negative total energy density in the BCP.

摘要

双齿配体 3-(1,3,5-三甲基-1H-吡唑-4-基)戊烷-2,4-二酮(HacacMePz)结合了两个不同的路易斯碱性位点。它与流行的卤键(XB)供体 2,3,5,6-四氟-1,4-二碘苯(TFDIB)形成结晶加合物,HacacMePz:TFDIB 比例为 2:3。在简化的图像中,加合物的拓扑结构对应于一个 网络。除了预期的乙酰丙酮酮 O 和吡唑 N 受体位点外,还观察到第三个不太常见的与 TFDIB 碘的短接触:受体位点再次是吡唑 π-体系中电子最丰富的位点。因此,这个亚胺 N 原子作为两个正交卤键的受体参与其中。几何结果和单点计算的评估在分子间接触的强度方面是一致的:传统的 N⋯I XB 是最短的(2.909(4) Å),并且在键临界点(BCP)处具有最高的电子密度(0.150 Å-3),其次是 O⋯I 接触(2.929(3) Å,0.109 Å-3),以及 π 接触(3.2157(3) Å,0.075 Å-3)。如果接受从 BCP 处的能量密度推断相互作用能的想法,那么短接触也遵循这个顺序。还有两个标准将短 N⋯I 接触确定为最相关的:相关的 C-I 键明显长于数据库平均值,并且它是 BCP 中唯一具有负总能量密度的分子间相互作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/724d/9657311/0ccb5f1ccecc/molecules-27-07550-g001.jpg

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