Suppr超能文献

太空生命探索数据库与极端环境微生物学的生物信息学

Database of space life investigations and bioinformatics of microbiology in extreme environments.

作者信息

Wang Junyong, Wang Tao, Zeng Xian, Wang Shanshan, Yu Zijie, Wei Yiqi, Cai Mengna, Chu Xin-Yi, Chen Yu Zong, Zhao Yufen

机构信息

Qian Xuesen Collaborative Research Center of Astrochemistry and Space Life Sciences, Institute of Drug Discovery Technology, Ningbo University, Ningbo, China.

Department of Biological Medicines & Shanghai Engineering Research Center of Immunotherapeutics, Fudan University School of Pharmacy, Shanghai, China.

出版信息

Front Microbiol. 2022 Nov 3;13:1017773. doi: 10.3389/fmicb.2022.1017773. eCollection 2022.

Abstract

Biological experiments performed in space crafts like space stations, space shuttles, and recoverable satellites has enabled extensive spaceflight life investigations (SLIs). In particular, SLIs have revealed distinguished space effects on microbial growth, survival, metabolite production, biofilm formation, virulence development and drug resistant mutations. These provide unique perspectives to ground-based microbiology and new opportunities for industrial pharmaceutical and metabolite productions. SLIs are with specialized experimental setups, analysis methods and research outcomes, which can be accessed by established databases National Aeronautics and Space Administration (NASA) Life Science Data Archive, Erasmus Experiment Archive, and NASA GeneLab. The increasing research across diverse fields may be better facilitated by databases of convenient search facilities and categorized presentation of comprehensive contents. We therefore developed the Space Life Investigation Database (SpaceLID) http://bidd.group/spacelid/, which collected SLIs from published academic papers. Currently, this database provides detailed menu search facilities and categorized contents about the studied phenomena, materials, experimental procedures, analysis methods, and research outcomes of 448 SLIs of 90 species (microbial, plant, animal, human), 81 foods and 106 pharmaceuticals, including 232 SLIs not covered by the established databases. The potential applications of SpaceLID are illustrated by the examples of published experimental design and bioinformatic analysis of spaceflight microbial phenomena.

摘要

在空间站、航天飞机和可回收卫星等航天器中进行的生物学实验,使得广泛的太空飞行生命研究(SLIs)成为可能。特别是,太空飞行生命研究揭示了太空对微生物生长、存活、代谢产物产生、生物膜形成、毒力发展和耐药性突变的显著影响。这些为地面微生物学提供了独特的视角,也为工业制药和代谢产物生产带来了新机遇。太空飞行生命研究拥有专门的实验装置、分析方法和研究成果,可通过美国国家航空航天局(NASA)生命科学数据存档库、伊拉斯谟实验存档库和NASA基因实验室等已建立的数据库获取。方便的搜索工具和全面内容分类呈现的数据库,可能会更好地促进跨不同领域的研究。因此,我们开发了太空生命研究数据库(SpaceLID)http://bidd.group/spacelid/,该数据库收集了已发表学术论文中的太空飞行生命研究。目前,该数据库提供了详细的菜单搜索工具,以及关于90个物种(微生物、植物、动物、人类)、81种食物和106种药物的448项太空飞行生命研究的研究现象、材料、实验程序、分析方法和研究成果的分类内容,其中包括232项已建立的数据库未涵盖的太空飞行生命研究。已发表的太空飞行微生物现象的实验设计和生物信息学分析示例,说明了太空生命研究数据库的潜在应用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/da84/9668873/19691fc63d93/fmicb-13-1017773-g001.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验