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单分子动力学表明核糖体在……的翻译位点组装。

Single-molecule dynamics suggest that ribosomes assemble at sites of translation in .

作者信息

Stoll Joshua, Zegarra Victor, Bange Gert, Graumann Peter L

机构信息

Centre for Synthetic Microbiology (SYNMIKRO) and Fachbereich Chemie, Philipps-Universität Marburg, Marburg, Germany.

出版信息

Front Microbiol. 2022 Nov 3;13:999176. doi: 10.3389/fmicb.2022.999176. eCollection 2022.

Abstract

Eukaryotic cells transcribe ribosomal RNA and largely assemble ribosomes in a structure called the nucleolus, where chromosomal regions containing rRNA operons are clustered. In bacteria, many rRNA operons cluster close to the origin regions that are positioned on the outer borders of nucleoids, close to polar areas, where translating 70S ribosomes are located. Because outer regions of the nucleoids contain the highest accumulation of RNA polymerase, it has been hypothesized that bacteria contain "nucleolus-like" structures. However, ribosome subunits freely diffuse through the entire cells, and could thus be assembled and matured throughout the non-compartmentalized cell. By tracking single molecules of two GTPases that play an essential role in ribosomal folding and processing in , we show that this process takes place at sites of translation, i.e., predominantly at the cell poles. Induction of the stringent response led to a change in the population of GTPases assumed to be active in maturation, but did not abolish nucleoid occlusion of ribosomes or of GTPases. Our findings strongly support the idea of the conceptualization of nucleolus-like structures in bacteria, i.e., rRNA synthesis, ribosomal protein synthesis and subunit assembly occurring in close proximity at the cell poles, facilitating the efficiency of ribosome maturation even under conditions of transient nutrient deprivation.

摘要

真核细胞转录核糖体RNA,并主要在一种称为核仁的结构中组装核糖体,含有rRNA操纵子的染色体区域在核仁中聚集。在细菌中,许多rRNA操纵子聚集在靠近位于类核体外边界、靠近极性区域(即正在翻译的70S核糖体所在位置)的起始区域附近。由于类核体的外部区域含有最高浓度的RNA聚合酶,因此有人推测细菌含有“类核仁”结构。然而,核糖体亚基在整个细胞中自由扩散,因此可以在无区室化的细胞中组装和成熟。通过追踪在核糖体折叠和加工过程中起关键作用的两种GTP酶的单个分子,我们发现这个过程发生在翻译位点,即主要在细胞两极。严紧反应的诱导导致假定在成熟过程中活跃的GTP酶群体发生变化,但并没有消除核糖体或GTP酶的类核体封闭。我们的研究结果有力地支持了细菌中类核仁结构概念化的观点,即在细胞两极附近紧密发生rRNA合成、核糖体蛋白合成和亚基组装,即使在短暂营养剥夺的条件下也能提高核糖体成熟效率。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7fc0/9670183/f9f43398296f/fmicb-13-999176-g001.jpg

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