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鉴定非酒精性脂肪性肝病向肝细胞癌进展过程中的葡萄糖代谢相关基因。

Identification of Glucose Metabolism-Related Genes in the Progression from Nonalcoholic Fatty Liver Disease to Hepatocellular Carcinoma.

机构信息

Department of Hepatobiliary Surgery, Xiaogan Hospital Affiliated to Wuhan University of Science and Technology, Xiaogan 432000, China.

Department of Anesthesiology, Xiaogan Hospital Affiliated to Wuhan University of Science and Technology, Xiaogan 432000, China.

出版信息

Genet Res (Camb). 2022 Nov 3;2022:8566342. doi: 10.1155/2022/8566342. eCollection 2022.

Abstract

Nonalcoholic fatty liver disease (NAFLD) is a manifestation of hepatic metabolic syndrome that varies in severity. Hepatocellular carcinoma progresses from NAFLD when there is heterogeneity in the infiltration of immune cells and molecules. A precise molecular classification of NAFLD remains lacking, allowing further exploration of the link between NAFLD and hepatocellular carcinoma. In this work, a weighted gene coexpression network analysis was used to identify two coexpression modules based on multiple omics data used to differentiate NAFLD subtypes. Additionally, key genes in the process of glucose metabolism and NAFLD were used to construct a prognostic model in a cohort of patients with hepatocellular carcinoma. Furthermore, the specific expression of signature genes in hepatocellular carcinoma cells was analyzed using a single-cell RNA sequencing approach. A total of 19 liver tissues of NAFLD patients were obtained from the GEO database, and 81 glucose metabolism-related genes were downloaded from the CTD database. In addition, based on nine signature genes, we constructed a prognostic model to divide the HCC cohort into high and low-risk groups. We also demonstrated a significant correlation between prognostic models and clinical phenotypes. Furthermore, we integrated single-cell RNA-sequencing data and immunology data to assess potential relationships between different molecular subtypes and hepatocellular carcinoma. Finally, our study discovered that the glucose metabolism pathway may play an important role in the process of NAFLD-hepatocellular carcinoma. In addition, three glucose metabolism-related genes (SERPINE1, VCAN, and TFPI2) may be the potential targets for the immunotherapy of patients with NAFLD-hepatocellular carcinoma.

摘要

非酒精性脂肪性肝病(NAFLD)是肝脏代谢综合征的一种表现形式,其严重程度各不相同。当免疫细胞和分子的浸润存在异质性时,肝细胞癌从 NAFLD 进展而来。NAFLD 的精确分子分类仍然缺乏,这使得进一步探讨 NAFLD 与肝细胞癌之间的联系成为可能。在这项工作中,使用加权基因共表达网络分析基于用于区分 NAFLD 亚型的多种组学数据来识别两个共表达模块。此外,使用关键基因在葡萄糖代谢和 NAFLD 过程中构建了肝细胞癌患者队列的预后模型。此外,使用单细胞 RNA 测序方法分析了肝细胞癌细胞中特征基因的特异性表达。从 GEO 数据库中获得了 19 例 NAFLD 患者的肝脏组织,从 CTD 数据库中下载了 81 个与葡萄糖代谢相关的基因。此外,基于九个特征基因,我们构建了一个预后模型,将 HCC 队列分为高风险和低风险组。我们还证明了预后模型与临床表型之间存在显著相关性。此外,我们整合了单细胞 RNA-seq 数据和免疫学数据,以评估不同分子亚型与肝细胞癌之间的潜在关系。最后,我们的研究发现葡萄糖代谢途径可能在 NAFLD-肝细胞癌的发生过程中发挥重要作用。此外,三个与葡萄糖代谢相关的基因(SERPINE1、VCAN 和 TFPI2)可能是 NAFLD-肝细胞癌患者免疫治疗的潜在靶点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ab8f/9649330/15e55147c0d8/GR2022-8566342.001.jpg

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