Chen Panpan, Gao Guanfei, Xu Yuanlin, Jia Peijun, Li Yan, Li Yating, Cao Jiaming, Du Jiangfeng, Zhang Shijie, Zhang Jingxin
School of Life Sciences, Zhengzhou University, Zhengzhou, China.
Front Cell Dev Biol. 2022 Nov 3;10:1036312. doi: 10.3389/fcell.2022.1036312. eCollection 2022.
Acute lymphoblastic leukemia (ALL) is a type of hematological malignancy and has a poor prognosis. In our study, we aimed to construct a prognostic model of ALL by identifying important genes closely related to ALL prognosis. We obtained transcriptome data (RNA-seq) of ALL samples from the GDC TARGET database and identified differentially expressed genes (DEGs) using the "DESeq" package of R software. We used univariate and multivariate cox regression analyses to screen out the prognostic genes of ALL. In our results, the risk score can be used as an independent prognostic factor to predict the prognosis of ALL patients [hazard ratio (HR) = 2.782, 95% CI = 1.903-4.068, < 0.001]. Risk score in clinical parameters has high diagnostic sensitivity and specificity for predicting overall survival of ALL patients, and the area under curve (AUC) is 0.864 in the receiver operating characteristic (ROC) analysis results. Our study evaluated a potential prognostic signature with six genes and constructed a risk model significantly related to the prognosis of ALL patients. The results of this study can help clinicians to adjust the treatment plan and distinguish patients with good and poor prognosis for targeted treatment.
急性淋巴细胞白血病(ALL)是一种血液系统恶性肿瘤,预后较差。在我们的研究中,我们旨在通过识别与ALL预后密切相关的重要基因来构建ALL的预后模型。我们从GDC TARGET数据库中获取了ALL样本的转录组数据(RNA测序),并使用R软件的“DESeq”包识别差异表达基因(DEG)。我们使用单变量和多变量cox回归分析筛选出ALL的预后基因。在我们的结果中,风险评分可作为独立的预后因素来预测ALL患者的预后[风险比(HR)=2.782,95%置信区间=1.903-4.068,<0.001]。临床参数中的风险评分对预测ALL患者的总生存期具有较高的诊断敏感性和特异性,在受试者工作特征(ROC)分析结果中曲线下面积(AUC)为0.864。我们的研究评估了一个由六个基因组成的潜在预后特征,并构建了一个与ALL患者预后显著相关的风险模型。本研究结果可帮助临床医生调整治疗方案,并区分预后良好和不良的患者进行靶向治疗。