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抗老化数据库(ANTIAGE-DB):一个用于预测靶向弹性蛋白酶、透明质酸酶和酪氨酸酶的抗老化化合物的数据库及服务器。

ANTIAGE-DB: A Database and Server for the Prediction of Anti-Aging Compounds Targeting Elastase, Hyaluronidase, and Tyrosinase.

作者信息

Papaemmanouil Christina D, Peña-García Jorge, Banegas-Luna Antonio Jesús, Kostagianni Androniki D, Gerothanassis Ioannis P, Pérez-Sánchez Horacio, Tzakos Andreas G

机构信息

Department of Chemistry, Section of Organic Chemistry and Biochemistry, University of Ioannina, 45110 Ioannina, Greece.

Structural Bioinformatics and High Performance Computing Research Group (BIO-HPC), Computer Engineering Department, Universidad Católica de Murcia (UCAM), 30107 Guadalupe, Spain.

出版信息

Antioxidants (Basel). 2022 Nov 17;11(11):2268. doi: 10.3390/antiox11112268.

Abstract

Natural products bear a multivariate biochemical profile with antioxidant, anti-inflammatory, antibacterial, and antitumoral properties. Along with their natural sources, they have been widely used both as anti-aging and anti-melanogenic agents due to their effective contribution in the elimination of reactive oxygen species (ROS) caused by oxidative stress. Their anti-aging activity is mainly related to their capacity of inhibiting enzymes like Human Neutrophil Elastase (HNE), Hyaluronidase (Hyal) and Tyrosinase (Tyr). Herein, we accumulated literature information (covering the period 1965-2020) on the inhibitory activity of natural products and their natural sources towards these enzymes. To navigate this information, we developed a database and server termed ANTIAGE-DB that allows the prediction of the anti-aging potential of target compounds. The server operates in two axes. First a comparison of compounds by shape similarity can be performed against our curated database of natural products whose inhibitory potential has been established in the literature. In addition, inverse virtual screening can be performed for a chosen molecule against the three targeted enzymes. The server is open access, and a detailed report with the prediction results is emailed to the user. ANTIAGE-DB could enable researchers to explore the chemical space of natural based products, but is not limited to, as anti-aging compounds and can predict their anti-aging potential. ANTIAGE-DB is accessed online.

摘要

天然产物具有多变量的生化特征,具备抗氧化、抗炎、抗菌和抗肿瘤特性。连同其天然来源一起,由于它们在消除由氧化应激引起的活性氧(ROS)方面的有效作用,它们已被广泛用作抗衰老和抗黑素生成剂。它们的抗衰老活性主要与其抑制诸如人中性粒细胞弹性蛋白酶(HNE)、透明质酸酶(Hyal)和酪氨酸酶(Tyr)等酶的能力有关。在此,我们积累了关于天然产物及其天然来源对这些酶的抑制活性的文献信息(涵盖1965年至2020年期间)。为了梳理这些信息,我们开发了一个名为ANTIAGE-DB的数据库和服务器,它可以预测目标化合物的抗衰老潜力。该服务器在两个维度上运行。首先,可以根据我们精心整理的、其抑制潜力已在文献中确定的天然产物数据库,通过形状相似性对化合物进行比较。此外,可以针对所选分子对三种目标酶进行反向虚拟筛选。该服务器是开放访问的,预测结果的详细报告将通过电子邮件发送给用户。ANTIAGE-DB可以使研究人员探索基于天然产物的化学空间,但不限于作为抗衰老化合物,并可以预测它们的抗衰老潜力。ANTIAGE-DB可在线访问。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/94fc/9686885/6f4ff67c0882/antioxidants-11-02268-g001.jpg

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