Bioenergy Group, Agharkar Research Institute, Gopal Ganesh Agarkar Road, Pune, 411004, India.
Savitribai Phule Pune University, Ganeshkhind, Pune, India.
Arch Microbiol. 2022 Dec 2;205(1):9. doi: 10.1007/s00203-022-03339-1.
An obligately anaerobic, rod-shaped, Gram-stain-positive, non-spore-forming, non-motile bacterial strain; designated as CtC72 was isolated from the rumen of cattle. The 16S rRNA gene sequence similarity of less than 98.65% revealed the strain as a member of the genus Actinomyces, nearest to but distinct from Actinomyces qiguomingii DSM 106201, Actinomyces ruminicola DSM 27982, Actinomyces procaprae JCM 33484, Actinomyces succiniciruminis TISTR 2317, Actinomyces glycerinitolerans TISTR 2318. The low values of digital DNA-DNA hybridization (< 70%) and average nucleotide identity (< 95%) further highlighted the distinctive nature of strain CtC72 from its closest relatives. The strain CtC72 could grow at temperatures between 30 and 50 °C (optimum 40 °C), pH between 6.0 and 9.0 (optimum 7.5-8.0), and NaCl between 0 and 1.5% (optimum 0%). The strain hydrolysed cellulose and xylan and utilised a range of mono-, di-, and oligo-saccharides as a source of carbon and energy. Glucose fermentation resulted in acetic acid and formic acid as major metabolic products, while propionic acid, lactic acid, and ethanol as minor products along with CO production. The DNA G + C content of strain CtC72 was 68.40 (mol%, T) and 68.05 (%, digital). Major cellular fatty acids (> 10%) were C, C ω9c and C ω9c DMA. Based on these data, we propose that strain CtC72 be classified as a novel species, Actinomyces ruminis sp. nov., under the genus Actinomyces. The type strain is CtC72 (= KCTC 15726 = JCM 32641 = MCC 3500).
一株严格厌氧、杆状、革兰氏阳性、不产芽孢、不运动的细菌菌株;命名为 CtC72,从牛的瘤胃中分离得到。16S rRNA 基因序列相似性低于 98.65%,表明该菌株是放线菌属的一个成员,与但不同于栖牙放线菌 DSM 106201、牛型放线菌 DSM 27982、普氏放线菌 JCM 33484、琥珀酸拟放线杆菌 TISTR 2317、甘油发酵放线菌 TISTR 2318 最为接近,但又有明显区别。较低的数字 DNA-DNA 杂交值(<70%)和平均核苷酸同一性值(<95%)进一步强调了菌株 CtC72 与其最接近亲缘关系的独特性质。菌株 CtC72 可以在 30 到 50°C(最佳 40°C)之间生长,pH 值在 6.0 到 9.0 之间(最佳 7.5-8.0),NaCl 浓度在 0 到 1.5%(最佳 0%)之间。该菌株可水解纤维素和木聚糖,并利用多种单糖、二糖和寡糖作为碳源和能源。葡萄糖发酵的主要代谢产物为乙酸和甲酸,而丙酸、乳酸和乙醇则为次要产物,同时还产生 CO。菌株 CtC72 的 DNA G+C 含量为 68.40(mol%,T)和 68.05(%,数字)。主要细胞脂肪酸(>10%)为 C、C ω9c 和 C ω9c DMA。基于这些数据,我们建议将菌株 CtC72 归类为一种新的物种,即栖牙放线菌 ruminis sp. nov.,属于放线菌属。该模式株为 CtC72(=KCTC 15726=JCM 32641=MCC 3500)。