Max Planck Institute for Polymer Research, Mainz, Germany.
Max Planck Institute for Polymer Research, Mainz, Germany; Van 't Hoff Institute for Molecular Sciences and Informatics Institute, University of Amsterdam, Amsterdam, the Netherlands.
Biophys J. 2023 Jun 6;122(11):2092-2098. doi: 10.1016/j.bpj.2022.12.004. Epub 2022 Dec 6.
Lipid asymmetry in plasma membrane of eukaryotes is ubiquitous. The first measurements reported compositional asymmetry: phosphatidylethanolamine and phosphatidylserine are mostly on the cytoplasmic leafet, while phosphatidylcholine and sphingomyelin are mostly on the exoplasmic leaflet. More recent experiments using lipidomics have evidenced the presence of saturation asymmetry between the two leaflets. A question that naturally arises is why such an asymmetry? To complicate matters, it is still largely unknown in which leaflet cholesterol lies. Here, we use chemical potentials to mimic flippase proteins responsible for maintenance of compositional asymmetry in silico. We show that saturation asymmetry naturally arises as a byproduct of phospholipid number asymmetry and sphingomyelin contents, thereby showing that some reported asymmetries may naturally result from others and do not necessarily require being externally driven. We also show that plasmalogen lipids' tendency to be highly unsaturated is also natural. Additionally, we tackle the problem of cholesterol and show that, while it is influenced by all asymmetries, the resulting cholesterol asymmetry tends to be fairly mild.
真核生物质膜的脂质不对称性无处不在。最早的测量报告了组成不对称性:乙醇胺磷脂和磷脂酰丝氨酸主要位于细胞质小叶,而磷脂酰胆碱和鞘磷脂主要位于外小叶。最近使用脂质组学的实验证明了两个小叶之间存在饱和不对称性。自然而然地出现了一个问题,为什么会存在这种不对称性?为了使事情复杂化,胆固醇位于哪个小叶仍然在很大程度上是未知的。在这里,我们使用化学势在计算机中模拟翻转酶蛋白,以维持组成不对称性。我们表明,饱和不对称性是磷脂数量不对称和鞘磷脂含量的自然产物,从而表明一些报道的不对称性可能自然来自其他不对称性,并不一定需要外部驱动。我们还表明,醚脂类的高度不饱和倾向也是自然的。此外,我们解决了胆固醇的问题,并表明,虽然它受到所有不对称性的影响,但由此产生的胆固醇不对称性往往相当温和。