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妊娠期糖尿病中人类胎盘来源环状RNA的鉴定及自噬相关环状RNA-微小RNA-信使核糖核酸调控网络

Identification of human placenta-derived circular RNAs and autophagy related circRNA-miRNA-mRNA regulatory network in gestational diabetes mellitus.

作者信息

Bao Yindi, Zhang Jun, Liu Yi, Wu Lianzhi, Yang Jing

机构信息

Department of Obstetrics and Gynecology, Renmin Hospital of Wuhan University, Wuhan, China.

Department of Obstetrics and Gynecology, Xiaogan Central Hospital Affiliated to Wuhan University of Science and Technology, Xiaogan, China.

出版信息

Front Genet. 2022 Nov 30;13:1050906. doi: 10.3389/fgene.2022.1050906. eCollection 2022.

Abstract

Gestational diabetes mellitus (GDM) is a metabolic and reproductive disease with serious risks and adverse health effects. However, the pathophysiological mechanism of GDM, especially the roles of circRNAs in its pathogenesis, is largely unknown. The objective of this study was to identify and investigate the roles of circRNAs in GDM. In the current study, placental circRNA expression profiles of normal controls and GDM patients were analyzed using high-throughput sequencing. Bioinformatics analysis identified a total of 4,955 circRNAs, of which 37 circRNAs were significantly deregulated in GDM placentas compared with NC placentas. GO and KEGG enrichment analyses demonstrated that metabolic process-associated terms and metabolic pathways that may be related to GDM were significantly enriched. The biological characteristics of placenta-derived circRNAs, such as their stability and RNase R resistance, were also validated Bioinformatics prediction. Moreover, we constructed the autophagy related circRNA-miRNA-mRNA regulatory network and further functional analysis revealed that the circCDH2-miR-33b-3p-ULK1 axis may be associated with autophagy in the placentas of GDM patients. Our study indicates that aberrant expression of circRNAs may play roles in autophagy in GDM placentas, providing new insights into GDM.

摘要

妊娠期糖尿病(GDM)是一种具有严重风险和不良健康影响的代谢性和生殖性疾病。然而,GDM的病理生理机制,尤其是circRNAs在其发病机制中的作用,在很大程度上尚不清楚。本研究的目的是鉴定并研究circRNAs在GDM中的作用。在本研究中,使用高通量测序分析了正常对照和GDM患者的胎盘circRNA表达谱。生物信息学分析共鉴定出4955个circRNAs,其中与正常对照胎盘相比,37个circRNAs在GDM胎盘中显著失调。GO和KEGG富集分析表明,与GDM可能相关的代谢过程相关术语和代谢途径显著富集。胎盘来源的circRNAs的生物学特性,如稳定性和对RNase R的抗性,也通过生物信息学预测得到了验证。此外,我们构建了自噬相关的circRNA-miRNA-mRNA调控网络,进一步的功能分析表明,circCDH2-miR-33b-3p-ULK1轴可能与GDM患者胎盘的自噬有关。我们的研究表明,circRNAs的异常表达可能在GDM胎盘的自噬中起作用,为GDM提供了新的见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c28b/9748685/535747de0cd8/fgene-13-1050906-g001.jpg

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