Department of Accelerator and Medical Physics, Institute for Quantum Medical Science, National Institutes for Quantum Science and Technology (QST), Chiba 263-8555, Japan; Division of Health Sciences, Osaka University, Osaka 565-0871, Japan.
Department of Charged Particle Therapy Research, Institute for Quantum Medical Science, National Institutes for Quantum Science and Technology (QST), Chiba 263-8555, Japan.
Phys Med. 2023 Jan;105:102508. doi: 10.1016/j.ejmp.2022.11.012. Epub 2022 Dec 20.
Track structure Monte Carlo (MC) codes have achieved successful outcomes in the quantitative investigation of radiation-induced initial DNA damage. The aim of the present study is to extend a Geant4-DNA radiobiological application by incorporating a feature allowing for the prediction of DNA rejoining kinetics and corresponding cell surviving fraction along time after irradiation, for a Chinese hamster V79 cell line, which is one of the most popular and widely investigated cell lines in radiobiology.
We implemented the Two-Lesion Kinetics (TLK) model, originally proposed by Stewart, which allows for simulations to calculate residual DNA damage and surviving fraction along time via the number of initial DNA damage and its complexity as inputs.
By optimizing the model parameters of the TLK model in accordance to the experimental data on V79, we were able to predict both DNA rejoining kinetics at low linear energy transfers (LET) and cell surviving fraction.
This is the first study to demonstrate the implementation of both the cell surviving fraction and the DNA rejoining kinetics with the estimated initial DNA damage, in a realistic cell geometrical model simulated by full track structure MC simulations at DNA level and for various LET. These simulation and model make the link between mechanistic physical/chemical damage processes and these two specific biological endpoints.
径迹结构蒙特卡罗(MC)代码在定量研究辐射诱导初始 DNA 损伤方面取得了成功。本研究的目的是通过引入一个特征来扩展 Geant4-DNA 放射生物学应用程序,该特征允许预测照射后随时间变化的 DNA 重接动力学和相应的细胞存活分数,针对中国仓鼠 V79 细胞系,这是放射生物学中最受欢迎和广泛研究的细胞系之一。
我们实现了由 Stewart 提出的双损伤动力学(TLK)模型,该模型允许通过初始 DNA 损伤的数量及其复杂性作为输入来模拟计算随时间残留的 DNA 损伤和存活分数。
通过根据 V79 的实验数据优化 TLK 模型的参数,我们能够预测低线性能量传递(LET)下的 DNA 重接动力学和细胞存活分数。
这是第一项研究,在 DNA 水平上使用全径迹结构 MC 模拟对真实细胞几何模型进行模拟,并针对各种 LET,展示了用估计的初始 DNA 损伤实现细胞存活分数和 DNA 重接动力学的实施。这些模拟和模型将机制物理/化学损伤过程与这两个特定的生物学终点联系起来。