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、 和 基因的表达与多态性及其与藏绵羊产羔数的关系()。

Expression and Polymorphisms of , and Genes and Their Association with Litter Size in Tibetan Sheep ().

机构信息

College of Agriculture and Animal Husbandry/Key Laboratory of Livestock and Poultry Genetics and Breeding on the Qinghai-Tibet Plateau, Ministry of Agriculture and Rural Affairs/Plateau Livestock Genetic Resources Protection and Innovative Utilization key Laboratory of Qinghai Province, Qinghai University, Xining 810016, China.

出版信息

Genes (Basel). 2022 Dec 7;13(12):2307. doi: 10.3390/genes13122307.

Abstract

SMAD1, SMAD2, and SMAD3 are important transcription factors downstream of the TGF-β/SMAD signaling pathway that mediates several physiological processes. In the current study, we used cloning sequencing, RT-qPCR, bioinformatics methods and iMLDR technology to clone the coding region of Tibetan sheep genes, analyze the protein structure and detect the tissue expression characteristics of Tibetan sheep genes, and detect the polymorphisms of 433 Tibetan sheep and analyze their correlation with litter size. The results showed that the ORFs of the , and genes were 1398 bp, 1404 bp and 1278 bp, respectively, and encoded 465, 467 and 425 amino acids, respectively. The SMAD1, SMAD2, and SMAD3 proteins were all unstable hydrophilic mixed proteins. , and were widely expressed in Tibetan sheep tissues, and all were highly expressed in the uterus, spleen, ovary and lung tissues. Litter sizes of the genotype CC in the gene g.10729C>T locus were significantly higher than that of CT ( < 0.05). In the gene g.21447C>T locus, the genotype TT individuals showed a higher litter size than the CC and CT genotype individuals ( < 0.05). These results preliminarily demonstrated that , and were the major candidate genes that affected litter size traits in Tibetan sheep and could be used as a molecular genetic marker for early auxiliary selection for improving reproductive traits during sheep breeding.

摘要

SMAD1、SMAD2 和 SMAD3 是转化生长因子-β/ SMAD 信号通路下游的重要转录因子,介导多种生理过程。本研究采用克隆测序、RT-qPCR、生物信息学方法和 iMLDR 技术克隆藏羊基因的编码区,分析蛋白质结构,检测藏羊基因的组织表达特征,检测 433 只藏羊的多态性,并分析其与产羔数的相关性。结果表明, 、 和 基因的 ORFs 分别为 1398bp、1404bp 和 1278bp,分别编码 465、467 和 425 个氨基酸。SMAD1、SMAD2 和 SMAD3 蛋白均为不稳定的亲水混合蛋白。 、 和 在藏羊组织中广泛表达,均在子宫、脾脏、卵巢和肺组织中高度表达。 基因 g.10729C>T 位点基因型 CC 的产羔数显著高于 CT( < 0.05)。在 基因 g.21447C>T 位点,TT 基因型个体的产羔数高于 CC 和 CT 基因型个体( < 0.05)。这些结果初步表明, 、 和 是影响藏羊产羔数性状的主要候选基因,可作为绵羊繁殖性状早期辅助选择的分子遗传标记。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a70f/9777977/16f490210904/genes-13-02307-g001a.jpg

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