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从海洋硅藻热带骨条藻的藻际环境中组装得到的活跃嗜鱼菌菌株的全基因组序列

Complete Genome Sequence of a Cognatishimia activa Strain Assembled from the Phycosphere of the Marine Diatom Skeletonema tropicum.

作者信息

Guo Kangli, Xu ShuaiShuai, Liu Yuanhao, Chen Zhuo, Hou Shengwei

机构信息

Shenzhen Key Laboratory of Marine Archaea Geo-Omics, Department of Ocean Science and Engineering, Southern University of Science and Technology, Shenzhen, China.

Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Guangzhou, China.

出版信息

Microbiol Resour Announc. 2023 Jan 24;12(1):e0116422. doi: 10.1128/mra.01164-22. Epub 2023 Jan 4.

DOI:10.1128/mra.01164-22
PMID:36598233
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9872673/
Abstract

Cognatishimia activa, previously known as , has been frequently isolated from marine environments. Here, we present the complete genome sequence of . strain SOCE 004, assembled from the phycosphere of a long-term laboratory-maintained culture of the diatom Skeletonema tropicum. The complete genome is 3,211,994 bp long, with an average G+C content of 53.69%. The genome contains 3,195 genes, including 3,133 protein-coding genes, 50 tRNAs, and 3 copies each of 5S, 16S, and 23S rRNA genes.

摘要

活性嗜同种菌,以前称为 ,经常从海洋环境中分离出来。在此,我们展示了 菌株SOCE 004的完整基因组序列,该序列是从长期实验室培养的热带骨条藻的藻际中组装得到的。完整基因组长度为3,211,994 bp,平均G+C含量为53.69%。该基因组包含3,195个基因,其中包括3,133个蛋白质编码基因、50个tRNA以及5S、16S和23S rRNA基因各3个拷贝。

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