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新种,以及 将 重新分类为 新组合, 将 重新分类为 新组合。

sp. nov., and reclassification of as comb. nov., and as comb. nov.

机构信息

Departamento de Microbiología y Ecología and Colección Española de Cultivos Tipo (CECT), Universitat de València, Spain.

出版信息

Int J Syst Evol Microbiol. 2019 Nov;69(11):3405-3413. doi: 10.1099/ijsem.0.003629.

Abstract

Strain CECT 7735, a marine Gram-reaction negative, aerobic, non-motile bacterium, was isolated from coastal seawater in Valencia, Spain. Strain CECT 7735 is chemoorganotrophic, mesophilic, slightly halophilic, grows at 15-28 °C but not at 4 or 37 °C, requires seawater for growth and grows up to 6 % salinity. The major cellular fatty acid is summed feature 8 (Cω7 and/or Cω6). The G+C content of the genome is 55.7 mol%. Comparative analysis of the 16S rRNA gene sequence shows the strain is affiliated to the family , in the class , with highest similarities to species (97.0-97.5 %), species (96.5-97.3 %) and (96.5 %). Further phylogenomic analysis through the up-to-date-bacterial core gene (UBCG) set showed to be its closest relative. Average nucleotide identity and DNA-DNA hybridization values are lower than 85 and 21 %, respectively, with its phylogenetic relatives, suggesting that strain CECT 7735 represents a new species. The average amino acid identity value was over 70 % with the genome of the type strain of and with all those of species. These values, together with UBCG set trees, suggest that the new species and belong to the same genus and that should be reclassified as a species. We conclude that strain CECT 7735 represents a new species in the genus , for which we propose the name sp. nov. In addition, is reclassified as comb. nov. From the same phylogenomic study, it can be concluded that should be reclassified in the genus as comb. nov.

摘要

CECT 7735 株,一种海洋革兰氏阴性、需氧、非运动细菌,从西班牙巴伦西亚沿海海水分离得到。CECT 7735 株是化能有机营养型、中温、轻度嗜盐、在 15-28°C 生长但不能在 4°C 或 37°C 生长、需要海水生长和生长到 6%盐度。主要细胞脂肪酸是 Cω7 和/或 Cω6 的总和特征 8。基因组的 G+C 含量为 55.7mol%。16S rRNA 基因序列的比较分析表明,该菌株属于科,在纲中,与种(97.0-97.5%)、种(96.5-97.3%)和种(96.5%)最为相似。通过最新细菌核心基因(UBCG)集的进一步系统发育分析表明,是其最接近的亲缘关系。平均核苷酸同一性和 DNA-DNA 杂交值分别低于 85%和 21%,与亲缘关系相近的种,表明 CECT 7735 株代表一个新种。与种的模式株的基因组和所有种的基因组的平均氨基酸同一性值均超过 70%。这些值与 UBCG 集树一起表明,新种和属于同一属,应该将重新分类为种。我们得出结论,CECT 7735 株代表属中的一个新种,我们提议将其命名为 sp. nov。此外,将重新分类为 comb. nov。从相同的系统发育研究可以得出结论,应该将重新分类为属中 comb. nov。

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