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人类蛋白质图谱——人类蛋白质组的单细胞图谱整合组学。

The human protein atlas-Integrated omics for single cell mapping of the human proteome.

机构信息

Department of Immunology, Genetics and Pathology, Uppsala University, Uppsala, Sweden.

出版信息

Protein Sci. 2023 Feb;32(2):e4562. doi: 10.1002/pro.4562.

Abstract

Studying the spatial distribution of proteins provides the basis for understanding the biology, molecular repertoire, and architecture of every human cell. The Human Protein Atlas (HPA) has grown into one of the world's largest biological databases, and in the most recent version, a major update of the structure of the database was performed. The data has now been organized into 10 different comprehensive sections, each summarizing different aspects of the human proteome and the protein-coding genes. In particular, large datasets with information on the single cell type level have been integrated, refining the tissue and cell type specificity and detailing the expression in cell states with an increased resolution. The multi-modal data constitute an important resource for both basic and translational science, and hold promise for integration with novel emerging technologies at the protein and RNA level.

摘要

研究蛋白质的空间分布为理解每个人类细胞的生物学、分子组成和结构提供了基础。人类蛋白质图谱(HPA)已经发展成为世界上最大的生物数据库之一,在最近的版本中,对数据库的结构进行了重大更新。现在,数据已经组织成 10 个不同的综合部分,每个部分总结了人类蛋白质组和蛋白质编码基因的不同方面。特别是,整合了具有单细胞类型水平信息的大型数据集,提高了组织和细胞类型特异性,并详细说明了细胞状态下的表达情况,提高了分辨率。多模态数据是基础和转化科学的重要资源,并且有望与蛋白质和 RNA 水平的新兴新技术相结合。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8590/9850435/64ea708c3035/PRO-32-e4562-g002.jpg

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