Hazra Anjan, Das Subhanwita, Bhattacharya Senjuti, Sur Susmita, Sengupta Chandan, Das Sauren
Indian Statistical Institute, Kolkata, West Bengal, India.
Department of Molecular Biology and Biotechnology, University of Kalyani, Nadia, India.
BioTechnologia (Pozn). 2021 Sep 30;102(3):277-283. doi: 10.5114/bta.2021.108723. eCollection 2021.
Ericales is an ancient eudicot order encompassing numerous species of economic and ornamental values. Despite several phylogenomic studies, the evolutionary relationship among certain families of this group remains uncertain. The present study assessed a multilocus species tree of Ericales based on 107 chloroplast genomes. The plastome derived microsatellite motifs were also simultaneously explored to check their dynamicity in corroboration of species phylogeny and systematics. In addition to resolving the usual hierarchy, the present phylogenetic analysis enabled to resolve the persisting lineage disparity with valid statistical support. Accordingly, divergence incongruences of Primulaceae, Ebenaceae, and Sapotaceae from earlier reports were reinstated in presently inferred phylogeny, which further supported the latest transcriptome-based relationship of the corresponding group. Various SSR motif characteristics emerged following the recognition of the evolutionary pathway. Numerical variation in tetranucleotide repeats showed even intraspecific or varietal differences in . Validation of plastome microsatellite-based polymorphism among the related taxa might pave the way for future phylogenetic and population studies of this economically important group.
杜鹃花目是一个古老的真双子叶植物目,包含许多具有经济价值和观赏价值的物种。尽管进行了多项系统发育基因组学研究,但该类群某些科之间的进化关系仍不明确。本研究基于107个叶绿体基因组评估了杜鹃花目的多基因座物种树。同时还探索了叶绿体基因组衍生的微卫星基序,以检查它们在证实物种系统发育和分类学方面的动态性。除了解决常见的层次结构外,本系统发育分析还能够在有效的统计支持下解决持续存在的谱系差异。因此,报春花科、柿科和山榄科与早期报告的分歧不一致在当前推断的系统发育中得到恢复,这进一步支持了相应类群最新的基于转录组的关系。在识别进化途径后出现了各种SSR基序特征。四核苷酸重复序列的数值变化甚至在种内或品种间也存在差异。相关类群中基于叶绿体基因组微卫星的多态性验证可能为这个经济上重要的类群未来的系统发育和种群研究铺平道路。