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基于转录组学分析妃子笑荔枝(Sonn.)果肉糖分减少的原因

Transcriptomics-based analysis of the causes of sugar receding in Feizixiao litchi ( Sonn.) pulp.

作者信息

Peng Junjie, Du Jingjia, Wuqiang Ma, Chen Tiantian, Shui Xian, Liao Haizhi, Lin Xiaokai, Zhou Kaibing

机构信息

Sanya Nanfan Research Institute of Hainan University, Sanya, China.

College of Horticulture, Hainan University, Haikou, China.

出版信息

Front Plant Sci. 2022 Dec 22;13:1083753. doi: 10.3389/fpls.2022.1083753. eCollection 2022.

Abstract

To investigate the causes of the "sugar receding" in 'Feizixiao' litchi ( Sonn.) pulp, the main sugar contents and sucrose metabolism enzyme activities were measured in pulp obtained in 2020 and 2021. Pulp RNA obtained in 2020 was extracted at 35, 63, and 69 days after anthesis (DAA) for transcriptome sequencing analysis. The differential expression of genes was verified by real-time PCR for both years. The results showed that after 63 DAA, the contents of soluble sugars and sucrose decreased, and the contents of fructose and glucose increased in both years. The dynamic changes in sucrose metabolism enzyme activities were similar in both years. After 63 DAA, except for acid invertase (AI) in 2021, the activities of other enzymes decreased significantly, and the net activity of sucrose metabolism enzymes showed a strong sucrose cleavage activity. There were 18061, 19575, and 985 differentially expressed genes in 35 d vs. 63 d, 35 d vs. 69 d, and 63 d vs. 69 d, respectively. Ninety-one sugar metabolism genes were screened out, including sucrose synthase (SS), sucrose phosphate synthase (SPS), AI, neutral invertase (NI), hexokinase (HK), glucose 6-phosphate dehydrogenase (G6PD), 6-phosphogluconate dehydrogenase (6PGD), phosphofructokinase (PFK), and pyruvate kinase (PK) genes. In 63 d vs. 69 d, seventy-five percent of sucrose metabolism genes were downregulated, seventy-seven percent of genes in glycolysis (EMP) were upregulated and the PFK genes were significantly upregulated. There was a significant linear correlation between the expression of 15 genes detected by real-time PCR and the transcriptome sequencing results ( = 0.9139, = 0.8912). These results suggest that the upregulated expression of PFK genes at maturity may enhance PFK activity and promote the degradation of soluble sugar in pulp through the EMP pathway, resulting in decreased soluble sugar and sucrose contents and "sugar receding" in pulp. Moreover, the downregulated expression of sucrose metabolism genes in pulp decreased the activities of these enzymes, but the net activity of these enzymes resulted in cleaved sucrose and replenished levels of reducing sugars, resulting in a stable reducing sugar content.

摘要

为探究‘妃子笑’荔枝果肉“退糖”的原因,测定了2020年和2021年所采果肉中的主要糖分含量及蔗糖代谢酶活性。提取了2020年花期后35、63和69天所采果肉的RNA进行转录组测序分析。两年均通过实时荧光定量PCR验证基因的差异表达。结果表明,花期后63天起,两年的可溶性糖和蔗糖含量均下降,果糖和葡萄糖含量上升。两年蔗糖代谢酶活性的动态变化相似。花期后63天起,除2021年的酸性转化酶(AI)外,其他酶活性均显著下降,蔗糖代谢酶的净活性表现出较强的蔗糖裂解活性。在花期后35天与63天、35天与69天、63天与69天比较中,分别有18061、19575和985个差异表达基因。筛选出91个糖代谢基因,包括蔗糖合酶(SS)、蔗糖磷酸合酶(SPS)、AI、中性转化酶(NI)、己糖激酶(HK)、葡萄糖6-磷酸脱氢酶(G6PD)、6-磷酸葡萄糖酸脱氢酶(6PGD)、磷酸果糖激酶(PFK)和丙酮酸激酶(PK)基因。在花期后63天与69天比较中,75%的蔗糖代谢基因下调,77%的糖酵解(EMP)基因上调且PFK基因显著上调。实时荧光定量PCR检测的15个基因的表达与转录组测序结果之间存在显著线性相关性(r = 0.9139,P = 0.8912)。这些结果表明,成熟期PFK基因的上调表达可能增强PFK活性,并通过EMP途径促进果肉中可溶性糖的降解,导致果肉中可溶性糖和蔗糖含量下降以及“退糖”。此外,果肉中蔗糖代谢基因的下调表达降低了这些酶的活性,但这些酶的净活性导致蔗糖裂解并补充还原糖水平,从而使还原糖含量保持稳定。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/da8c/9814114/00cac5f033b3/fpls-13-1083753-g001.jpg

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