Nguyen Huy-Dung, Clément Michaël, Mansencal Boris, Coupé Pierrick
Univ. Bordeaux, CNRS, Bordeaux INP, LaBRI, UMR 5800, 33400 Talence, France.
Univ. Bordeaux, CNRS, Bordeaux INP, LaBRI, UMR 5800, 33400 Talence, France.
Comput Med Imaging Graph. 2023 Mar;104:102171. doi: 10.1016/j.compmedimag.2022.102171. Epub 2023 Jan 2.
Alzheimer's Disease is the most common cause of dementia. Accurate diagnosis and prognosis of this disease are essential to design an appropriate treatment plan, increasing the life expectancy of the patient. Intense research has been conducted on the use of machine learning to identify Alzheimer's Disease from neuroimaging data, such as structural magnetic resonance imaging. In recent years, advances of deep learning in computer vision suggest a new research direction for this problem. Current deep learning-based approaches in this field, however, have a number of drawbacks, including the interpretability of model decisions, a lack of generalizability information and a lower performance compared to traditional machine learning techniques. In this paper, we design a two-stage framework to overcome these limitations. In the first stage, an ensemble of 125 U-Nets is used to grade the input image, producing a 3D map that reflects the disease severity at voxel-level. This map can help to localize abnormal brain areas caused by the disease. In the second stage, we model a graph per individual using the generated grading map and other information about the subject. We propose to use a graph convolutional neural network classifier for the final classification. As a result, our framework demonstrates comparative performance to the state-of-the-art methods in different datasets for both diagnosis and prognosis. We also demonstrate that the use of a large ensemble of U-Nets offers a better generalization capacity for our framework.
阿尔茨海默病是痴呆症最常见的病因。准确诊断和预测这种疾病对于制定合适的治疗方案、延长患者预期寿命至关重要。针对利用机器学习从神经影像数据(如结构磁共振成像)中识别阿尔茨海默病,已经开展了大量研究。近年来,深度学习在计算机视觉领域的进展为这个问题提出了新的研究方向。然而,该领域目前基于深度学习的方法存在一些缺点,包括模型决策的可解释性、缺乏泛化性信息以及与传统机器学习技术相比性能较低。在本文中,我们设计了一个两阶段框架来克服这些局限性。在第一阶段,使用由125个U-Net组成的集成模型对输入图像进行分级,生成一个反映体素级疾病严重程度的三维图谱。该图谱有助于定位由疾病引起的异常脑区。在第二阶段,我们利用生成的分级图谱和关于个体的其他信息为每个个体构建一个图模型。我们建议使用图卷积神经网络分类器进行最终分类。结果,我们的框架在不同数据集上的诊断和预测方面都展现出与最先进方法相当的性能。我们还证明,使用大量U-Net组成的集成模型为我们的框架提供了更好的泛化能力。