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钠/氯共转运蛋白 2 并非鱼类特有,广泛存在于两栖动物、非鸟类爬行动物和部分哺乳动物中。

Na/Cl cotransporter 2 is not fish-specific and is widely found in amphibians, non-avian reptiles, and select mammals.

机构信息

School of Life Science and Technology, Tokyo Institute of Technology, Yokohama, Japan.

Department of Integrative Biology, College of Natural Science, Michigan State University, East Lansing, Michigan, United States.

出版信息

Physiol Genomics. 2023 Mar 1;55(3):113-131. doi: 10.1152/physiolgenomics.00143.2022. Epub 2023 Jan 16.

Abstract

Solute carrier 12 (Slc12) is a family of electroneutral cation-coupled chloride (Cl) cotransporters. Na/K/2Cl (Nkcc) and Na/Cl cotransporters (Ncc) belong to the Nkcc/Ncc subfamily. Human and mouse possess one gene for the Na/Cl cotransporter ( gene: ), whereas teleost fishes possess multiple genes, () and (), in addition to their species-specific paralogs. Amphibians and squamates have two genes: () and . However, the evolutionary relationship between and remains unresolved, and the presence of () in mammals has not been clarified. Synteny and phylogenetic analyses of vertebrate genome databases showed that is the ortholog of , and is present in most ray-finned fishes, coelacanths, amphibians, reptiles, and a few mammals (e.g., platypus and horse) but pseudogenized or deleted in birds, most mammals, and some ray-finned fishes (pufferfishes). This shows that is widely present among bony vertebrates and pseudogenized or deleted independently in multiple lineages. Notably, as compared with some fish that show varied tissue expression profile, spotted gar, African clawed frog, red-eared slider turtle, and horse express in the ovaries or premature gonads. In horse tissues, an unexpectedly large number of splicing variants for Slc12a10 have been cloned, many of which encode truncated forms of Slc12a10, suggesting that the functional constraints of horse are weakened, which may be in the process of becoming a pseudogene. Our results elaborate on the evolution of Nkcc/Ncc subfamily of Slc12 in vertebrates. is not a fish-specific gene and is present in a few mammals (e.g., platypus and horse), non-avian reptiles, amphibians, but was pseudogenized or deleted in most mammals (e.g., human, mouse, cat, cow, and rhinoceros), birds, and some ray-finned fishes (pufferfishes).

摘要

溶质载体 12(Slc12)是一类电中性阳离子偶联氯离子(Cl)共转运体。Na+/K+/2Cl(Nkcc)和 Na+/Cl 共转运体(Ncc)属于 Nkcc/Ncc 亚家族。人和鼠都拥有一个 Na+/Cl 共转运体基因(基因:),而硬骨鱼类除了具有物种特异性的旁系同源基因外,还拥有多个基因,()、()和()。两栖动物和爬行动物有两个基因:()和。然而,和之间的进化关系尚未解决,哺乳动物中是否存在()也尚未阐明。脊椎动物基因组数据库的基因同线性和系统发生分析表明,是基因的直系同源基因,而在大多数真骨鱼类、腔棘鱼、两栖动物、爬行动物和少数哺乳动物(如鸭嘴兽和马)中存在,但在鸟类、大多数哺乳动物和一些真骨鱼类(河豚鱼)中已发生假基因化或缺失。这表明在硬骨脊椎动物中广泛存在,并且在多个谱系中独立发生假基因化或缺失。值得注意的是,与一些表现出不同组织表达谱的鱼类相比,斑点叉尾鮰、非洲爪蟾、红耳滑龟和马在卵巢或未成熟性腺中表达。在马组织中,已经克隆出大量 Slc12a10 的剪接变体,其中许多编码 Slc12a10 的截断形式,这表明马 Slc12a10 的功能约束减弱,可能正在成为假基因。我们的研究结果阐述了脊椎动物 Nkcc/Ncc 亚家族 Slc12 的进化。不是鱼类特异性基因,存在于少数哺乳动物(如鸭嘴兽和马)、非鸟类爬行动物、两栖动物中,但在大多数哺乳动物(如人类、鼠、猫、牛和犀牛)、鸟类和一些真骨鱼类(河豚鱼)中已发生假基因化或缺失。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/23c0/9988527/b3f47e78ea13/pg-00143-2022r01.jpg

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