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亚硫酸盐解毒 F 依赖性酶的结构来自 Methanococcales。

Structures of the sulfite detoxifying F-dependent enzyme from Methanococcales.

机构信息

Max Planck Institute for Marine Microbiology, Bremen, Germany.

Biochemistry, Faculty of Chemistry, University of Kaiserslautern-Landau, Kaiserslautern, Germany.

出版信息

Nat Chem Biol. 2023 Jun;19(6):695-702. doi: 10.1038/s41589-022-01232-y. Epub 2023 Jan 19.

Abstract

Methanogenic archaea are main actors in the carbon cycle but are sensitive to reactive sulfite. Some methanogens use a sulfite detoxification system that combines an FH-oxidase with a sulfite reductase, both of which are proposed precursors of modern enzymes. Here, we present snapshots of this coupled system, named coenzyme F-dependent sulfite reductase (Group I Fsr), obtained from two marine methanogens. Fsr organizes as a homotetramer, harboring an intertwined six-[4Fe-4S] cluster relay characterized by spectroscopy. The wire, spanning 5.4 nm, electronically connects the flavin to the siroheme center. Despite a structural architecture similar to dissimilatory sulfite reductases, Fsr shows a siroheme coordination and a reaction mechanism identical to assimilatory sulfite reductases. Accordingly, the reaction of Fsr is unidirectional, reducing sulfite or nitrite with FH. Our results provide structural insights into this unique fusion, in which a primitive sulfite reductase turns a poison into an elementary block of life.

摘要

产甲烷古菌是碳循环的主要参与者,但对亚硫酸盐很敏感。一些产甲烷菌使用一种亚硫酸盐解毒系统,该系统将 FH-氧化酶与亚硫酸盐还原酶结合在一起,这两种酶都是现代酶的前体。在这里,我们展示了来自两种海洋产甲烷菌的这种偶联系统的快照,该系统命名为依赖辅酶 F 的亚硫酸盐还原酶(Group I Fsr)。Fsr 组织为同源四聚体,具有通过光谱学表征的交织六-[4Fe-4S]簇接力。该金属丝跨越 5.4nm,电子连接黄素和亚铁血红素中心。尽管结构架构类似于异化亚硫酸盐还原酶,但 Fsr 表现出与同化亚硫酸盐还原酶相同的亚铁血红素配位和反应机制。因此,Fsr 的反应是单向的,用 FH 还原亚硫酸盐或亚硝酸盐。我们的结果提供了对这种独特融合的结构见解,其中原始的亚硫酸盐还原酶将毒物转化为生命的基本组成部分。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/86ed/10229431/3ef46ba6f49a/41589_2022_1232_Fig1_HTML.jpg

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