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从新加坡圣约翰岛分离的真菌的多样性和生物合成潜力。

Diversity and Biosynthetic Potential of Fungi Isolated from St. John's Island, Singapore.

机构信息

Singapore Institute of Food and Biotechnology Innovation (SIFBI), Agency for Science, Technology and Research (A*STAR), 31 Biopolis Way, #01-02 Nanos, Singapore 138669, Singapore.

School of Biological Sciences, Nanyang Technological University, Singapore 637551, Singapore.

出版信息

Int J Mol Sci. 2023 Jan 5;24(2):1033. doi: 10.3390/ijms24021033.

Abstract

Adaptation to a wide variety of habitats allows fungi to develop unique abilities to produce diverse secondary metabolites with diverse bioactivities. In this study, 30 fungi isolated from St. John's Island, Singapore were investigated for their general biosynthetic potential and their ability to produce antimicrobial secondary metabolites (SMs). All the 30 fungal isolates belong to the Phylum and are distributed into 6 orders and 18 genera with Order having the highest number of representative (37%). Screening for polyketide synthase (PKS) and nonribosomal peptide synthetase (NRPS) genes using degenerate PCR led to the identification of 23 polyketide synthases (PKSs) and 5 nonribosomal peptide synthetases (NRPSs) grouped into nine distinct clades based on their reduction capabilities. Some of the identified PKSs genes share high similarities between species and known reference genes, suggesting the possibility of conserved biosynthesis of closely related compounds from different fungi. Fungal extracts were tested for their antimicrobial activity against , Methicillin-resistant (MRSA), and . Bioassay-guided fractionation of the active constituents from two promising isolates resulted in the isolation of seven compounds: Penilumamides A, D, and E from strain F4335 and xanthomegnin, viomellein, pretrichodermamide C and vioxanthin from strain F7180. Vioxanthin exhibited the best antibacterial activity with IC values of 3.0 μM and 1.6 μM against and MRSA respectively. Viomellein revealed weak antiproliferative activity against A549 cells with an IC of 42 μM. The results from this study give valuable insights into the diversity and biosynthetic potential of fungi from this unique habitat and forms a background for an in-depth analysis of the biosynthetic capability of selected strains of interest with the aim of discovering novel fungal natural products.

摘要

适应各种各样的栖息地使真菌能够发展出独特的能力,产生具有各种生物活性的多样化次生代谢物。在这项研究中,研究了从新加坡圣约翰岛分离出的 30 种真菌,以研究它们的一般生物合成潜力及其产生抗菌次生代谢物 (SM) 的能力。所有 30 种真菌分离物都属于 门,并分布在 6 个目和 18 个属中,其中目具有最高数量的代表 (37%)。使用简并 PCR 筛选聚酮合酶 (PKS) 和非核糖体肽合酶 (NRPS) 基因,鉴定出 23 种聚酮合酶 (PKS) 和 5 种非核糖体肽合酶 (NRPS),根据其还原能力分为 9 个不同的分支。一些鉴定出的 PKS 基因在物种间和已知参考基因之间具有高度相似性,这表明不同真菌中密切相关化合物的生物合成具有保守性。测试了真菌提取物对 、耐甲氧西林金黄色葡萄球菌 (MRSA) 和 的抗菌活性。从两个有前途的分离物中活性成分的生物测定指导分离得到了 7 种化合物:来自菌株 F4335 的 Penilumamides A、D 和 E,以及来自菌株 F7180 的 xanthomegnin、viomellein、pretrichodermamide C 和 vioxanthin。Vioxanthin 对 和 MRSA 的抗菌活性最好,IC 值分别为 3.0 μM 和 1.6 μM。Viomellein 对 A549 细胞表现出较弱的抗增殖活性,IC 为 42 μM。这项研究的结果为该独特生境真菌的多样性和生物合成潜力提供了有价值的见解,并为深入分析选定感兴趣菌株的生物合成能力奠定了基础,旨在发现新型真菌天然产物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ff37/9861175/69d1089a7d8e/ijms-24-01033-g001.jpg

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