• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

北极孔斯峡湾生态系统中海洋核质大DNA病毒与真核浮游生物群落的协方差:海洋微生物生态系统的宏基因组分析

Covariance of Marine Nucleocytoplasmic Large DNA Viruses with Eukaryotic Plankton Communities in the Sub-Arctic Kongsfjorden Ecosystem: A Metagenomic Analysis of Marine Microbial Ecosystems.

作者信息

Kim Kang Eun, Joo Hyoung Min, Lee Taek-Kyun, Kim Hyun-Jung, Kim Yu Jin, Kim Bo Kyung, Ha Sun-Yong, Jung Seung Won

机构信息

Library of Marine Samples, Korea Institute of Ocean Science & Technology, Geoje 53201, Republic of Korea.

Department of Ocean Science, University of Science & Technology, Daejeon 34113, Republic of Korea.

出版信息

Microorganisms. 2023 Jan 9;11(1):169. doi: 10.3390/microorganisms11010169.

DOI:10.3390/microorganisms11010169
PMID:36677461
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9862967/
Abstract

Nucleocytoplasmic large DNA viruses (NCLDVs) infect various marine eukaryotes. However, little is known about NCLDV diversity and their relationships with eukaryotic hosts in marine environments, the elucidation of which will advance the current understanding of marine ecosystems. This study characterizes the interplay between NCLDVs and the eukaryotic plankton community (EPC) in the sub-Arctic area using metagenomics and metabarcoding to investigate NCLDVs and EPC, respectively, in the Kongsfjorden ecosystem of Svalbard (Norway) in April and June 2018. (Dinophyceae) is the most prevalent eukaryotic taxon in the EPC in April, during which time (31.8%), (25.1%), (14.7%) and (13.1%) predominate. However, in June, the predominant taxon is (Pelagophyceae), and the NCLDVs, (32.9%), (29.1%), and (18.5%) appear in higher proportions with an increase in Pelagophyceae, Bacillariophyceae, and Chlorophyta groups. Thus, differences in NCLDVs may be caused by changes in EPC composition in response to environmental changes, such as increases in water temperature and light intensity. Taken together, these findings are particularly relevant considering the anticipated impact of NCLDV-induced EPC control mechanisms on polar regions and, therefore, improve the understanding of the Sub-Arctic Kongsfjorden ecosystem.

摘要

核质大DNA病毒(NCLDVs)感染各种海洋真核生物。然而,对于海洋环境中NCLDVs的多样性及其与真核宿主的关系知之甚少,阐明这些将推动当前对海洋生态系统的理解。本研究利用宏基因组学和代谢条形码技术分别研究了2018年4月和6月挪威斯瓦尔巴德群岛孔斯峡湾生态系统中的NCLDVs和真核浮游生物群落(EPC),以表征亚北极地区NCLDVs与真核浮游生物群落之间的相互作用。4月,甲藻是EPC中最普遍的真核生物分类群,在此期间,聚球藻属(31.8%)、原绿球藻属(25.1%)、球石藻属(14.7%)和绿藻纲(13.1%)占主导地位。然而,在6月,主要分类群是褐藻纲,随着褐藻纲、硅藻纲和绿藻门群体的增加,NCLDVs中,长尾病毒目(32.9%)、肌尾病毒目(29.1%)和短尾病毒目(18.5%)的比例更高。因此,NCLDVs的差异可能是由于EPC组成随环境变化(如水温升高和光照强度增加)而发生的变化所致。综上所述,考虑到NCLDV诱导的EPC控制机制对极地地区的预期影响,这些发现尤为重要,因此有助于增进对亚北极孔斯峡湾生态系统的理解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5a4b/9862967/26c8e424ab00/microorganisms-11-00169-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5a4b/9862967/9c4c2f2fd679/microorganisms-11-00169-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5a4b/9862967/9f8e57b00790/microorganisms-11-00169-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5a4b/9862967/a7ff754365da/microorganisms-11-00169-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5a4b/9862967/abfbc0dbe87c/microorganisms-11-00169-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5a4b/9862967/e5c5ca34e727/microorganisms-11-00169-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5a4b/9862967/01b9b1621e9f/microorganisms-11-00169-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5a4b/9862967/26c8e424ab00/microorganisms-11-00169-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5a4b/9862967/9c4c2f2fd679/microorganisms-11-00169-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5a4b/9862967/9f8e57b00790/microorganisms-11-00169-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5a4b/9862967/a7ff754365da/microorganisms-11-00169-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5a4b/9862967/abfbc0dbe87c/microorganisms-11-00169-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5a4b/9862967/e5c5ca34e727/microorganisms-11-00169-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5a4b/9862967/01b9b1621e9f/microorganisms-11-00169-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5a4b/9862967/26c8e424ab00/microorganisms-11-00169-g007.jpg

相似文献

1
Covariance of Marine Nucleocytoplasmic Large DNA Viruses with Eukaryotic Plankton Communities in the Sub-Arctic Kongsfjorden Ecosystem: A Metagenomic Analysis of Marine Microbial Ecosystems.北极孔斯峡湾生态系统中海洋核质大DNA病毒与真核浮游生物群落的协方差:海洋微生物生态系统的宏基因组分析
Microorganisms. 2023 Jan 9;11(1):169. doi: 10.3390/microorganisms11010169.
2
Quantitative Assessment of Nucleocytoplasmic Large DNA Virus and Host Interactions Predicted by Co-occurrence Analyses.基于共现分析预测核质大 DNA 病毒与宿主相互作用的定量评估。
mSphere. 2021 Apr 21;6(2):e01298-20. doi: 10.1128/mSphere.01298-20.
3
Giant viral signatures on the Greenland ice sheet.格陵兰冰盖上的巨型病毒特征。
Microbiome. 2024 May 17;12(1):91. doi: 10.1186/s40168-024-01796-y.
4
Ecological Interaction between Bacteriophages and Bacteria in Sub-Arctic Kongsfjorden Bay, Svalbard, Norway.挪威斯瓦尔巴德群岛北极圈内孔斯峡湾中噬菌体与细菌的生态相互作用
Microorganisms. 2024 Jan 28;12(2):276. doi: 10.3390/microorganisms12020276.
5
Biogeography of marine giant viruses reveals their interplay with eukaryotes and ecological functions.海洋巨型病毒的生物地理学揭示了它们与真核生物的相互作用和生态功能。
Nat Ecol Evol. 2020 Dec;4(12):1639-1649. doi: 10.1038/s41559-020-01288-w. Epub 2020 Sep 7.
6
"Megavirales", a proposed new order for eukaryotic nucleocytoplasmic large DNA viruses.“巨型病毒目”,一个新提议的真核核质大 DNA 病毒的目。
Arch Virol. 2013 Dec;158(12):2517-21. doi: 10.1007/s00705-013-1768-6. Epub 2013 Jun 29.
7
Viral Characteristics of the Warm Atlantic and Cold Arctic Water Masses in the Nordic Seas.北欧海域暖大西洋和冷北极水团的病毒特征。
Appl Environ Microbiol. 2021 Oct 28;87(22):e0116021. doi: 10.1128/AEM.01160-21. Epub 2021 Sep 1.
8
Exploring nucleo-cytoplasmic large DNA viruses in Tara Oceans microbial metagenomes.探索塔利亚海洋微生物宏基因组中的核质大 DNA 病毒。
ISME J. 2013 Sep;7(9):1678-95. doi: 10.1038/ismej.2013.59. Epub 2013 Apr 11.
9
Prokaryotic Community Composition in Arctic Kongsfjorden and Sub-Arctic Northern Bering Sea Sediments As Revealed by 454 Pyrosequencing.通过454焦磷酸测序揭示的北极孔斯峡湾和亚北极白令海北部沉积物中的原核生物群落组成
Front Microbiol. 2017 Dec 12;8:2498. doi: 10.3389/fmicb.2017.02498. eCollection 2017.
10
Virus Genomes from Deep Sea Sediments Expand the Ocean Megavirome and Support Independent Origins of Viral Gigantism.深海沉积物中的病毒基因组扩展了海洋巨型病毒组,并支持病毒巨型化的独立起源。
mBio. 2019 Mar 5;10(2):e02497-18. doi: 10.1128/mBio.02497-18.

引用本文的文献

1
Hybrid sequencing reveals the genome of a Chrysochromulina parva virus and highlight its distinct replication strategy.混合测序揭示了一种微小金藻病毒的基因组,并突出了其独特的复制策略。
BMC Genomics. 2025 May 17;26(1):498. doi: 10.1186/s12864-025-11700-z.
2
Spatiotemporal distribution patterns and assembly mechanisms of eukaryotic plankton communities in Liujiaxia Reservoir at the northeastern edge of the Tibetan Plateau.青藏高原东北边缘刘家峡水库真核浮游生物群落的时空分布格局与组装机制
Microbiol Spectr. 2025 Feb 4;13(2):e0100924. doi: 10.1128/spectrum.01009-24. Epub 2024 Dec 13.
3
Metavirome Insights into the Diversity and Potential Pathogenic Infection of in the Coastal Seas of the Republic of Korea.

本文引用的文献

1
Viral Characteristics of the Warm Atlantic and Cold Arctic Water Masses in the Nordic Seas.北欧海域暖大西洋和冷北极水团的病毒特征。
Appl Environ Microbiol. 2021 Oct 28;87(22):e0116021. doi: 10.1128/AEM.01160-21. Epub 2021 Sep 1.
2
Eukaryotic virus composition can predict the efficiency of carbon export in the global ocean.真核病毒的组成可以预测全球海洋中碳输出的效率。
iScience. 2020 Dec 29;24(1):102002. doi: 10.1016/j.isci.2020.102002. eCollection 2021 Jan 22.
3
CheckV assesses the quality and completeness of metagenome-assembled viral genomes.
韩国沿海水域元病毒组对多样性和潜在致病感染的洞察
Pathogens. 2024 Oct 27;13(11):935. doi: 10.3390/pathogens13110935.
4
Ecological Interaction between Bacteriophages and Bacteria in Sub-Arctic Kongsfjorden Bay, Svalbard, Norway.挪威斯瓦尔巴德群岛北极圈内孔斯峡湾中噬菌体与细菌的生态相互作用
Microorganisms. 2024 Jan 28;12(2):276. doi: 10.3390/microorganisms12020276.
5
Metavirome Profiling and Dynamics of the DNA Viral Community in Seawater in Chuuk State, Federated States of Micronesia.密克罗尼西亚联邦楚克州海水中病毒组学特征及 DNA 病毒群落动态分析。
Viruses. 2023 May 31;15(6):1293. doi: 10.3390/v15061293.
CheckV 评估宏基因组组装病毒基因组的质量和完整性。
Nat Biotechnol. 2021 May;39(5):578-585. doi: 10.1038/s41587-020-00774-7. Epub 2020 Dec 21.
4
Zooming on dynamics of marine microbial communities in the phycosphere of Akashiwo sanguinea (Dinophyta) blooms.聚焦赤潮甲藻(甲藻门)藻体周围海洋微生物群落的动态变化。
Mol Ecol. 2021 Jan;30(1):207-221. doi: 10.1111/mec.15714. Epub 2020 Nov 14.
5
Biogeography of marine giant viruses reveals their interplay with eukaryotes and ecological functions.海洋巨型病毒的生物地理学揭示了它们与真核生物的相互作用和生态功能。
Nat Ecol Evol. 2020 Dec;4(12):1639-1649. doi: 10.1038/s41559-020-01288-w. Epub 2020 Sep 7.
6
Faster Atlantic currents drive poleward expansion of temperate phytoplankton in the Arctic Ocean.较快的大西洋洋流推动北极海洋中温带浮游植物向极地扩张。
Nat Commun. 2020 Apr 6;11(1):1705. doi: 10.1038/s41467-020-15485-5.
7
Dynamic genome evolution and complex virocell metabolism of globally-distributed giant viruses.全球分布的巨型病毒的动态基因组进化和复杂的病毒细胞代谢。
Nat Commun. 2020 Apr 6;11(1):1710. doi: 10.1038/s41467-020-15507-2.
8
Enhanced eddy activity in the Beaufort Gyre in response to sea ice loss.北极波弗特环流中因海冰减少而增强的涡动活动。
Nat Commun. 2020 Feb 6;11(1):761. doi: 10.1038/s41467-020-14449-z.
9
Seasonal Dynamics of Algae-Infecting Viruses and Their Inferred Interactions with Protists.藻类感染病毒的季节动态及其与原生动物的相互作用推断。
Viruses. 2019 Nov 9;11(11):1043. doi: 10.3390/v11111043.
10
A distinct lineage of giant viruses brings a rhodopsin photosystem to unicellular marine predators.一种独特的巨型病毒谱系为单细胞海洋捕食者带来了视紫红质光系统。
Proc Natl Acad Sci U S A. 2019 Oct 8;116(41):20574-20583. doi: 10.1073/pnas.1907517116. Epub 2019 Sep 23.