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基于海鲜的新型生物活性肽的计算机筛选:以太平洋牡蛎()为例。

In Silico Prospecting for Novel Bioactive Peptides from Seafoods: A Case Study on Pacific Oyster ().

机构信息

Department of Food Science and Technology, College of Agricultural Sciences, Oregon State University, Corvallis, OR 97333, USA.

Seafood Research and Education Center, Oregon State University, Astoria, OR 97103, USA.

出版信息

Molecules. 2023 Jan 9;28(2):651. doi: 10.3390/molecules28020651.

Abstract

Pacific oyster (), an abundant bivalve consumed across the Pacific, is known to possess a wide range of bioactivities. While there has been some work on its bioactive hydrolysates, the discovery of bioactive peptides (BAPs) remains limited due to the resource-intensive nature of the existing discovery pipeline. To overcome this constraint, in silico-based prospecting is employed to accelerate BAP discovery. Major oyster proteins were digested virtually under a simulated gastrointestinal condition to generate virtual peptide products that were screened against existing databases for peptide bioactivities, toxicity, bitterness, stability in the intestine and in the blood, and novelty. Five peptide candidates were shortlisted showing antidiabetic, anti-inflammatory, antihypertensive, antimicrobial, and anticancer potential. By employing this approach, oyster BAPs were identified at a faster rate, with a wider applicability reach. With the growing market for peptide-based nutraceuticals, this provides an efficient workflow for candidate scouting and end-use investigation for targeted functional product preparation.

摘要

太平洋牡蛎()是一种在太平洋地区广泛食用的双壳贝类,具有多种生物活性。虽然已经对其生物活性水解产物进行了一些研究,但由于现有发现途径资源密集型的性质,生物活性肽(BAP)的发现仍然有限。为了克服这一限制,基于计算机的勘探被用于加速 BAP 的发现。主要的牡蛎蛋白在模拟的胃肠道条件下进行虚拟消化,生成虚拟肽产物,然后针对现有数据库筛选肽的生物活性、毒性、苦味、在肠道和血液中的稳定性以及新颖性。有 5 种肽候选物被筛选出来,具有抗糖尿病、抗炎、降压、抗菌和抗癌的潜力。通过采用这种方法,可以更快地识别牡蛎 BAP,并且适用性更广。随着基于肽的营养保健品市场的增长,这为候选物的侦察和针对目标功能产品制备的最终用途研究提供了一种有效的工作流程。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/05a4/9867001/f8b4de18691e/molecules-28-00651-g001.jpg

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