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中国枣中 SWEET 基因的全基因组鉴定和表达谱分析。

Genome-wide identification and expression profile analysis of SWEET genes in Chinese jujube.

机构信息

Hebei Agricultural University, College of Horticulture, Baoding, Hebei, China.

Hebei Agricultural University, Research Center of Chinese Jujube, Baoding, Hebei, China.

出版信息

PeerJ. 2023 Jan 17;11:e14704. doi: 10.7717/peerj.14704. eCollection 2023.

Abstract

The novel sugar transporter known as SWEET (sugars will eventually be exported transporter) is involved in the transport and distribution of photosynthesis products in plants. The SWEET protein is also involved in pollen development, nectar secretion, stress responses, and other important physiological processes. Although SWEET genes have been characterized and identified in model plants, such as and rice, little is known about them in jujube. In this study, the molecular characteristics of the SWEET gene family in the Chinese jujube ( Mill.) and their expression patterns in different organs, at different fruit developmental stages, and under abiotic stress were analyzed. A total of 19 ZjSWEET genes were identified in jujube through a genome-wide study; these were classified into four sub-groups based on their phylogenic relationships. The gene structure analysis of ZjSWEET genes showed that all the members had introns. The expression patterns of different ZjSWEET genes varied significantly in different organs (root, shoot, leave, flower, fruit), which indicated that ZjSWEETs play different roles in multiple organs. According to the expression profiles by quantitative real-time PCR analysis during fruit development, the expression levels of the two genes (, ) gradually increased with the development of the fruit and reached a high level at the full-red fruit stage. A prediction of the -acting regulatory elements indicated that the promoter sequences of ZjSWEETs contained nine types of phytohormone-responsive -regulatory elements and six environmental factors. In addition, the expression profiles by quantitative real-time PCR analysis showed that some of the ZjSWEETs responded to environmental changes; was highly induced in response to cold stress, and was significantly up-regulated in response to alkali and salt stresses. This study showed that the functions of the ZjSWEET family members of jujube are different, and some may play an important role in sugar accumulation and abiotic stress in jujube.

摘要

已知新型糖转运蛋白 SWEET(糖最终会被输出的转运蛋白)参与植物光合作用产物的运输和分配。SWEET 蛋白还参与花粉发育、花蜜分泌、应激反应和其他重要的生理过程。尽管 SWEET 基因已在模式植物(如 和 )中得到了鉴定和研究,但在枣中对其了解甚少。本研究通过全基因组研究分析了中国枣( )SWEET 基因家族的分子特征及其在不同器官、不同果实发育阶段和非生物胁迫下的表达模式。通过全基因组研究在枣中鉴定出 19 个 ZjSWEET 基因;根据系统发育关系将其分为四个亚组。ZjSWEET 基因的结构分析表明,所有成员都有内含子。不同 ZjSWEET 基因在不同器官(根、茎、叶、花、果)中的表达模式差异显著,表明 ZjSWEET 基因在多个器官中发挥不同的作用。根据果实发育过程中定量实时 PCR 分析的表达谱,两个基因(、)的表达水平随果实的发育逐渐增加,在全红果期达到高水平。对启动子序列的预测表明,ZjSWEET 启动子序列包含九种植物激素响应元件和六种环境因子。此外,定量实时 PCR 分析的表达谱表明,一些 ZjSWEET 基因对环境变化有响应;在冷胁迫下高度诱导表达,在碱盐胁迫下显著上调表达。本研究表明,枣 ZjSWEET 家族成员的功能不同,一些可能在枣中糖积累和非生物胁迫中发挥重要作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cd08/9854374/904ade204cdc/peerj-11-14704-g001.jpg

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