Short-term exposure to fine particulate matter and genome-wide DNA methylation in chronic obstructive pulmonary disease: A panel study conducted in Beijing, China.

BACKGROUND

Fine particulate matter (PM) is a crucial risk factor for chronic obstructive pulmonary disease (COPD). However, the mechanisms whereby PM contribute to COPD risk have not been fully elucidated. Accumulating evidence suggests that epigenetics, including DNA methylation, play an important role in this process; however, the association between PM exposure and genome-wide DNA methylation in patients with COPD has not been studied.

OBJECTIVE

To evaluate the association of personal exposure to PM and genome-wide DNA methylation changes in the peripheral blood of patients with COPD.

METHODS

A panel study was conducted in Beijing, China. We repeatedly measured and collected personal PM data for 72 h. Genome-wide DNA-methylation of peripheral blood was analyzed using the Illumina Infinium Human Methylation BeadChip (850 k). A linear-mixed effect model was used to identify the differentially methylated probe (DMP) associated with PM. Finally, we performed a functional enrichment analysis of the DMPs that were significantly associated with PM.

RESULTS

A total of 24 COPD patients were enrolled and 48 repeated DNA methylation measurements were associated in this study. When the false discovery rate was < 0.05, 19 DMPs were significantly associated with PM and were annotated to corresponding genes. Functional enrichment analysis of these genes showed that they were related to the response to toxic substances, regulation of tumor necrosis factor superfamily cytokine production, regulation of photosensitivity 3-kinase signaling, and other pathways.

CONCLUSION

This study provided evidence for a significant relationship between personal PM exposure and DNA methylation in patients with COPD. Our research also revealed a new biological pathway explaining the adverse effects of PM exposure on COPD risk.