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用于拓展蓝藻生物钟节律研究的模型系统。

: A model system for expanding the study of cyanobacterial circadian rhythms.

作者信息

Zhao Chi, Xu Yao, Wang Bo, Johnson Carl Hirschie

机构信息

Department of Biological Sciences, Vanderbilt University, Nashville, TN, United States.

Department of Chemical and Biomolecular Engineering, Vanderbilt University, Nashville, TN, United States.

出版信息

Front Physiol. 2023 Jan 4;13:1085959. doi: 10.3389/fphys.2022.1085959. eCollection 2022.

Abstract

The study of circadian rhythms in bacteria was transformed by studies of the cyanobacterium . However, in a number of respects is atypical, and while those unusual characteristics were helpful for rapid progress in the past, another commonly used cyanobacterial species, sp. PCC 6803, may be more representative and therefore more productive for future insights into bacterial clock mechanisms. In the past, circadian studies of have suffered from not having an excellent reporter of circadian gene expression, but we introduce here a new luminescence reporter that rivals the reporters that have been used so successfully in . Using this new system, we generate for the first time in circadian period mutants resulting from point mutations. The temperature compensation and dark-pulse resetting that mediates entrainment to the environment is characterized. Moreover, we analyse the complex organization of clock genes in and identify which genes are essential for circadian rhythmicity and adaptive fitness for entrainment and optimal phase alignment to environmental cycles (and which genes are not). These developments will provide impetus for new approaches towards understanding daily timekeeping mechanisms in bacteria.

摘要

蓝细菌的研究改变了对细菌昼夜节律的研究。然而,在许多方面它是非典型的,虽然这些不寻常的特征在过去有助于快速取得进展,但另一种常用的蓝细菌物种集胞藻属PCC 6803可能更具代表性,因此对于未来深入了解细菌生物钟机制可能更有成效。过去,对蓝细菌的昼夜节律研究因缺乏出色的昼夜节律基因表达报告基因而受到影响,但我们在此引入了一种新的发光报告基因,它可与在集胞藻中成功使用的报告基因相媲美。利用这个新系统,我们首次在蓝细菌中产生了由点突变导致的昼夜节律周期突变体。对介导与环境同步的温度补偿和暗脉冲重置进行了表征。此外,我们分析了蓝细菌中生物钟基因的复杂组织,并确定哪些基因对于昼夜节律性以及与环境周期的同步和最佳相位对齐的适应性适应至关重要(哪些基因并非如此)。这些进展将为理解细菌日常计时机制的新方法提供动力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e6bd/9846126/32e0c07ea2a3/fphys-13-1085959-g001.jpg

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