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利用整合生物信息学分析鉴定 EMP1 为卵巢癌顺铂耐药的关键基因。

Identification of EMP1 as a critical gene for cisplatin resistance in ovarian cancer by using integrated bioinformatics analysis.

机构信息

Department of Obstetrics and Gynecology, Renmin Hospital of Wuhan University, Wuhan, Hubei, China.

Department of Obstetrics and Gynecology, Hubei Clinical Medicine Research Center for Individualized Cancer Diagnosis and Therapy, The First Affiliated Hospital of Yangtze University, Jingzhou, Hubei, China.

出版信息

Cancer Med. 2023 Apr;12(7):9024-9040. doi: 10.1002/cam4.5637. Epub 2023 Jan 27.


DOI:10.1002/cam4.5637
PMID:36708070
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10134351/
Abstract

BACKGROUND: Cisplatin resistance is among the main reasons for the poor prognosis of ovarian cancer (OC) patients. Until now, effective biomarkers for predicting cisplatin resistance in OC and specific drugs for reversing this resistance are lacking. This study identified the critical gene associated with cisplatin resistance in OC and provided a potential target for overcoming this resistance. METHODS: Differentially expressed genes between cisplatin-resistant and -sensitive OCs were identified by screening public datasets. Survival analysis was conducted to screen prognosis-related DEGs. CIBERSORT, ESTIMATE, and immune checkpoint genes were used to assess the association between EMP1 expression and tumor microenvironment features. CTRP and GDSC databases were employed to analyze the correlation between EMP1 expression and cisplatin resistance. Furthermore, immunohistochemistry, qPCR, Western blotting, siRNA interference, and the CCK8 assay were performed to verify the role of EMP1 in cisplatin resistance in vitro. Finally, xenograft mouse models were generated to further confirm the role of EMP1 in cisplatin resistance in vivo. RESULTS: EMP1 was identified as a critical gene associated with cisplatin resistance in OC. According to bioinformatics analyses, increased EMP1 expression was linked to higher stromal/ESTIMATE scores as well as greater ICG expression levels. The in vitro experiments showed that EMP1 was highly expressed in cisplatin-resistant OC tissues and cells, and silencing this EMP1 expression enhanced OC cell sensitivity to cisplatin. Finally, in vivo experiments confirmed that EMP1 promotes tumor growth and cisplatin resistance. CONCLUSIONS: EMP1 can act as a predictive biomarker for cisplatin resistance in OC and as a potential therapeutic target.

摘要

背景:顺铂耐药是卵巢癌(OC)患者预后不良的主要原因之一。到目前为止,还缺乏预测 OC 顺铂耐药的有效生物标志物和逆转这种耐药的特异性药物。本研究鉴定了与 OC 顺铂耐药相关的关键基因,并为克服这种耐药提供了一个潜在的靶点。

方法:通过筛选公共数据集鉴定顺铂耐药和敏感 OC 之间的差异表达基因。进行生存分析以筛选与预后相关的 DEGs。使用 CIBERSORT、ESTIMATE 和免疫检查点基因评估 EMP1 表达与肿瘤微环境特征之间的关联。使用 CTRP 和 GDSC 数据库分析 EMP1 表达与顺铂耐药之间的相关性。此外,进行免疫组织化学、qPCR、Western blot、siRNA 干扰和 CCK8 测定以验证 EMP1 在体外顺铂耐药中的作用。最后,生成异种移植小鼠模型以进一步证实 EMP1 在体内顺铂耐药中的作用。

结果:EMP1 被鉴定为与 OC 顺铂耐药相关的关键基因。根据生物信息学分析,EMP1 表达增加与更高的基质/ESTIMATE 评分以及更高的 ICG 表达水平相关。体外实验表明,EMP1 在顺铂耐药 OC 组织和细胞中高表达,沉默 EMP1 表达可增强 OC 细胞对顺铂的敏感性。最后,体内实验证实 EMP1 促进肿瘤生长和顺铂耐药。

结论:EMP1 可作为 OC 顺铂耐药的预测生物标志物和潜在的治疗靶点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ebe2/10134351/8391d1a33c4f/CAM4-12-9024-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ebe2/10134351/b4ae76f6434a/CAM4-12-9024-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ebe2/10134351/40fcc145c945/CAM4-12-9024-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ebe2/10134351/9644a0cbe195/CAM4-12-9024-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ebe2/10134351/4ee878282813/CAM4-12-9024-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ebe2/10134351/95a37d673382/CAM4-12-9024-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ebe2/10134351/7b1504060258/CAM4-12-9024-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ebe2/10134351/8391d1a33c4f/CAM4-12-9024-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ebe2/10134351/b4ae76f6434a/CAM4-12-9024-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ebe2/10134351/40fcc145c945/CAM4-12-9024-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ebe2/10134351/9644a0cbe195/CAM4-12-9024-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ebe2/10134351/4ee878282813/CAM4-12-9024-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ebe2/10134351/95a37d673382/CAM4-12-9024-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ebe2/10134351/7b1504060258/CAM4-12-9024-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ebe2/10134351/8391d1a33c4f/CAM4-12-9024-g008.jpg

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[4]
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本文引用的文献

[1]
Metastatic recurrence in colorectal cancer arises from residual EMP1 cells.

Nature. 2022-11

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Comparative cisplatin reactivity towards human Zn7-metallothionein-2 and MTF-1 zinc fingers: potential implications in anticancer drug resistance.

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