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系统发育基因组学,包括对两种蛾类(夜蛾总科,灯蛾科)新测序的线粒体基因组,揭示了曼氏伊斯基夜蛾(分类地位不确定)是灯蛾亚科的成员。

Phylogenomics including the newly sequenced mitogenomes of two moths (Noctuoidea, Erebidae) reveals Ischyja manlia (incertae sedis) as a member of subfamily Erebinae.

作者信息

Riyaz Muzafar, Shah Rauf Ahmad, Ignacimuthu Savarimuthu, Sivasankaran Kuppusamy

机构信息

Division of Taxonomy and Biodiversity, Entomology Research Institute, Loyola College, Chennai, 600 034, Tamil Nadu, India.

Xavier Research Foundation, St. Xavier's College, Palayamkottai, 627002, Tamil Nadu, India.

出版信息

Genetica. 2023 Apr;151(2):105-118. doi: 10.1007/s10709-023-00180-2. Epub 2023 Jan 28.

Abstract

We sequenced the mitogenomes of two Erebid species, namely Ischyja manlia (Cramer, 1776) and Rusicada privata (Walker, 1865) to analyse the phylogenetic relationship and to establish the taxonomic position of incertae sedis members of the family Erebidae. The two circular genomes of I. manlia and R. privata were 15,879 bp and 15,563 bp long, respectively. The gene order was identical, containing 13 protein-coding genes (PCGs), 22 tRNA genes, two rRNA genes, and an A + T-rich region. The nucleotide compositions of the A + T-rich region of both mitogenomes were similar: 80.65% for R. privata, and 81.09% for I. manlia. The AT skew and GC skew were slightly positive in I. manlia and negative in R. privata. In I. manlia and R. privata, except for cox1 which started with CGA and TTG codons, all the other 12 PCGs started with ATN codon. The A + T-rich regions of I. manlia and R. privata were 433 and 476 bp long, respectively, and contained common characteristics of Noctuoidea moths. At present, Ischyja is treated as Erebinae incertae sedis. However, phylogenetic analysis conducted in the present study reveals that the genus Ischyja is most likely to be a member of the subfamily Erebinae.

摘要

我们对两种灯蛾科物种的线粒体基因组进行了测序,即曼氏绮夜蛾(Ischyja manlia,克莱默,1776年)和暗绮夜蛾(Rusicada privata,沃克,1865年),以分析系统发育关系,并确定灯蛾科分类地位不确定成员的分类位置。曼氏绮夜蛾和暗绮夜蛾的两个环状基因组长度分别为15,879 bp和15,563 bp。基因排列顺序相同,包含13个蛋白质编码基因(PCGs)、22个tRNA基因、两个rRNA基因和一个富含A+T的区域。两种线粒体基因组富含A+T区域的核苷酸组成相似:暗绮夜蛾为80.65%,曼氏绮夜蛾为81.09%。曼氏绮夜蛾的AT偏斜和GC偏斜略为正值,暗绮夜蛾的则为负值。在曼氏绮夜蛾和暗绮夜蛾中,除了cox1以CGA和TTG密码子起始外,其他12个PCGs均以ATN密码子起始。曼氏绮夜蛾和暗绮夜蛾的富含A+T区域长度分别为433 bp和476 bp,并且具有夜蛾超科蛾类的共同特征。目前,绮夜蛾属被视为灯蛾亚科分类地位不确定的成员。然而,本研究进行的系统发育分析表明,绮夜蛾属很可能是灯蛾亚科的一个成员。

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