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可解释深度学习辅助光致变色传感器用于β-内酰胺类抗生素识别。

Explainable Deep Learning-Assisted Photochromic Sensor for β-Lactam Antibiotic Identification.

机构信息

College of Chemistry and Materials Science, Guangdong Provincial Key Laboratory of Functional Supramolecular Coordination Materials and Applications, Su Bingtian Center for Speed Research and Training, Jinan University, Guangzhou 510632, China.

Research Center for Green Printing Nanophotonic Materials, Jiangsu Key Laboratory for Environmental Functional Materials, School of Chemistry and Life Sciences, Suzhou University of Science and Technology, Suzhou 215009, China.

出版信息

Anal Chem. 2023 Feb 14;95(6):3309-3316. doi: 10.1021/acs.analchem.2c04346. Epub 2023 Jan 30.

Abstract

Photochromic sensors have the advantages of diverse isomers for multi-analysis, providing more sensing information and possessing more recognition units and more sensitivity to external stimulations, but they present enormous complexity with various stimulations as well. Deep learning (DL) algorithms contribute a huge advantage at analyzing nonlinear and multidimensional data, but they suffer from nontransparent inner networks, "black-boxes". In this work, we employed the explainable DL approach to process and explicate photochromic sensing. Spirooxazine metallic complexes were adopted to prepare a multi-state analysis array for β-Lactams identification and quantitation. A dataset of 2520 unduplicated fluorescence intensity images was collected for convolutional neural network (CNN) operation. The method clearly discriminated six β-Lactams with 97.98% prediction accuracy and allowed rapid quantification with a concentration range from 1 to 100 mg/L. The photochromic sensing mechanism was verified via molecular simulation and class activation mapping, which explicated how the CNN model assesses the importance of photochromic sensor states and makes a discrimination decision. The explainable DL-assisted analysis method establishes an end-to-end strategy to ascertain and verify the complicated sensing mechanism for device optimization and even new scientific discovery.

摘要

光致变色传感器具有多种异构体进行多分析的优点,提供更多的传感信息,并具有更多的识别单元和对外部刺激的更高敏感性,但它们也存在各种刺激带来的巨大复杂性。深度学习(DL)算法在分析非线性和多维数据方面具有巨大优势,但它们受到不透明的内部网络(“黑盒”)的限制。在这项工作中,我们采用了可解释的 DL 方法来处理和阐明光致变色传感。螺噁嗪金属配合物被用于制备用于β-内酰胺类抗生素识别和定量的多状态分析阵列。收集了 2520 张不重复的荧光强度图像数据集,用于卷积神经网络(CNN)操作。该方法可以清楚地区分六种β-内酰胺类抗生素,预测准确率达到 97.98%,并允许快速定量,浓度范围为 1 至 100mg/L。通过分子模拟和类别激活映射验证了光致变色传感机制,阐明了 CNN 模型如何评估光致变色传感器状态的重要性并做出区分决策。可解释的 DL 辅助分析方法建立了一种端到端的策略,以确定和验证复杂的传感机制,从而优化设备,甚至进行新的科学发现。

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