Department of Biological Sciences, Marquette University, Milwaukee, Wisconsin, USA.
Department of Zoology, Milwaukee Public Museum, Milwaukee, Wisconsin, USA.
mSystems. 2023 Feb 23;8(1):e0125422. doi: 10.1128/msystems.01254-22. Epub 2023 Jan 31.
Microbial communities can be structured by both deterministic and stochastic processes, but the relative importance of these processes remains unknown. The ambiguity partly arises from an inability to disentangle soil microbial processes from confounding factors, such as aboveground plant communities or anthropogenic disturbance. In this study, we characterized the relative contributions of determinism and stochasticity to assembly processes of soil bacterial communities across a large environmental gradient of undisturbed Antarctic soils. We hypothesized that harsh soils would impose a strong environmental selection on microbial communities, whereas communities in benign soils would be structured largely by dispersal. Contrary to our expectations, dispersal was the dominant assembly mechanism across the entire soil environmental gradient, including benign environments. The microbial community composition reflects slowly changing soil conditions and dispersal limitation of isolated sites. Thus, stochastic processes, as opposed to deterministic, are primary drivers of soil ecosystem assembly across space at our study site. This is especially surprising given the strong environmental constraints on soil microorganisms in one of the harshest environments on the planet, suggesting that dispersal could be a driving force in microbial community assembly in soils worldwide. Because of their diversity and ubiquity, microbes provide an excellent means to tease apart how natural communities are structured. In general, ecologists believe that stochastic assembly processes, like random drift and dispersal, should dominate in benign environments while deterministic processes, like environmental filtering, should be prevalent in harsh environments. To help resolve this debate, we analyzed microbial community composition in pristine Antarctic soils devoid of human influence or plant communities for eons. Our results demonstrate that dispersal limitation is a surprisingly potent force of community limitation throughout all soil conditions. Thus, dispersal appears to be a driving force of microbial community assembly, even in the harshest of conditions.
微生物群落可以通过确定性和随机性过程来构建,但这些过程的相对重要性尚不清楚。这种模糊性部分源于无法将土壤微生物过程与混杂因素(如地上植物群落或人为干扰)区分开来。在这项研究中,我们描述了确定性和随机性对未受干扰的南极土壤环境梯度中土壤细菌群落组装过程的相对贡献。我们假设,恶劣的土壤会对微生物群落施加强烈的环境选择,而在良性土壤中,群落则主要由扩散来构建。与我们的预期相反,扩散是整个土壤环境梯度(包括良性环境)中主要的组装机制。微生物群落组成反映了缓慢变化的土壤条件和孤立地点的扩散限制。因此,与确定性过程相反,随机过程是我们研究地点跨空间土壤生态系统组装的主要驱动力。这尤其令人惊讶,因为在地球上最恶劣的环境之一中,土壤微生物受到强烈的环境限制,这表明扩散可能是土壤微生物群落组装的驱动力。
由于其多样性和普遍性,微生物为我们提供了一种极好的方法来探究自然群落是如何构建的。一般来说,生态学家认为,在良性环境中,随机性组装过程(如随机漂移和扩散)应该占主导地位,而在恶劣环境中,确定性过程(如环境过滤)应该占主导地位。为了帮助解决这一争论,我们分析了未受人类影响或植物群落影响的古老南极土壤中的微生物群落组成。我们的研究结果表明,扩散限制在所有土壤条件下都是群落限制的一个强大力量。因此,即使在最恶劣的条件下,扩散似乎也是微生物群落组装的驱动力。