Manetsberger Julia, Caballero Gómez Natacha, Benomar Nabil, Christie Graham, Abriouel Hikmate
Área de Microbiología, Departamento de Ciencias de la Salud, Facultad de Ciencias Experimentales, Universidad de Jaén, Jaén, Spain.
Department of Chemical Engineering and Biotechnology, University of Cambridge, Cambridge, United Kingdom.
Microbiol Spectr. 2023 Jan 31;11(2):e0401322. doi: 10.1128/spectrum.04013-22.
Olive agriculture presents an integral economic and social pillar of the Mediterranean region with 95% of the world's olive tree population concentrated in this area. A diverse ecosystem consisting of fungi, archaea, viruses, protozoa, and microbial communities-the soil microbiome-plays a central role in maintaining healthy soils while keeping up productivity. Spore-forming organisms (i.e., the sporobiota) have been identified as one of the predominant communities of the soil microbiome and are known for the wide variety of antimicrobial properties and extraordinary resistance. Hence, the aim of this work was to determine the culturable sporobiota of Spanish olive orchards and characterize its phenotypic properties toward common environmental challenges. A collection of 417 heat-resistant bacteria were isolated from five Spanish olive orchards. This collective was termed the "olive sporobiota." Rep-PCR clustering of representative isolates revealed that they all belonged to the group of Bacillus spp., or closely related species, showing a great variety of species and strains. Representative isolates showed susceptibility to common antibiotics, as well as good resistance to heavy metal exposure, with an order of metal tolerance determined as iron > copper > nickel > manganese > zinc > cadmium. Finally, we showed that the application of mineral fertilizer can in several cases enhance bacterial growth and thus potentially increase the relative proportion of the sporobiota in the olive grove ecosystem. In summary, the identification of the culturable olive sporobiota increases our understanding of the microbial diversity in Spanish olive groves, while tolerance and resistance profiles provide important insights into the phenotypic characteristics of the microbial community. Microbial communities are a key component of healthy soils. Spore-forming microorganisms represent a large fraction of this community-termed the "sporobiota"-and play a central role in creating a conducive environment for plant growth and food production. In addition, given their unique features, such as extraordinary stability and antimicrobial properties, members of the sporobiota present interesting candidates for biotechnological applications, such as sustainable plant protection products or in a clinical setting. For this, however, more information is needed on the spore-forming community of agricultural installations, ultimately promoting a transition toward a more sustainable agriculture.
橄榄种植是地中海地区不可或缺的经济和社会支柱,世界上95%的橄榄树都集中在该地区。由真菌、古细菌、病毒、原生动物和微生物群落(即土壤微生物组)组成的多样化生态系统,在维持土壤健康并保持生产力方面发挥着核心作用。形成孢子的生物(即孢子菌群)已被确定为土壤微生物组的主要群落之一,并以其广泛的抗菌特性和超强的抗性而闻名。因此,这项工作的目的是确定西班牙橄榄园可培养的孢子菌群,并描述其在面对常见环境挑战时的表型特性。从西班牙的五个橄榄园中分离出417株耐热细菌。这个集合被称为“橄榄孢子菌群”。对代表性分离株进行的重复PCR聚类分析表明,它们都属于芽孢杆菌属或密切相关的物种,显示出种类和菌株的多样性。代表性分离株对常见抗生素敏感,同时对重金属暴露具有良好的抗性,确定的金属耐受顺序为铁>铜>镍>锰>锌>镉。最后,我们表明,在几种情况下,施用矿物肥料可以促进细菌生长,从而有可能增加橄榄树林生态系统中孢子菌群的相对比例。总之,可培养橄榄孢子菌群的鉴定增进了我们对西班牙橄榄园微生物多样性的理解,而耐受性和抗性特征为微生物群落的表型特征提供了重要见解。微生物群落是健康土壤的关键组成部分。形成孢子的微生物占这个群落(称为“孢子菌群”)的很大一部分,并在为植物生长和粮食生产创造有利环境方面发挥着核心作用。此外,鉴于它们具有非凡的稳定性和抗菌特性等独特特征,孢子菌群的成员是生物技术应用(如可持续植物保护产品或临床应用)的有趣候选对象。然而,为此需要更多关于农业设施中形成孢子群落的信息,最终推动向更可持续农业的转变。