Suppr超能文献

基于逻辑回归和支持向量机算法的增强CT图像组学模型在膀胱癌HRG无创预测中的构建及预后价值

Construction and prognostic value of enhanced CT image omics model for noninvasive prediction of HRG in bladder cancer based on logistic regression and support vector machine algorithm.

作者信息

Li Qing, Luo Yang, Liu Dawei, Li Bin, Liu Yufeng, Wang Tao

机构信息

Department of Urology, The Fifth Affiliated Hospital, Southern Medical University, Guangzhou, Guangdong, China.

出版信息

Front Oncol. 2023 Jan 16;12:966506. doi: 10.3389/fonc.2022.966506. eCollection 2022.

Abstract

BACKGROUND

Urothelial Carcinoma of the bladder (BLCA) is the most prevalent cancer of the urinary system. In cancer patients, HRG fusion is linked to a poor prognosis. The prediction of HRG expression by imaging omics in BLCA has not yet been fully investigated.

METHODS

HRG expression in BLCA and healthy adjoining tissues was primarily identified utilizing data sourced from The Cancer Genome Atlas (TCGA). Using Kaplan-Meier survival curves and Landmark analysis, the relationship between HRG expression, clinicopathological parameters, and overall survival (OS) was investigated. Additionally, gene set variation analysis (GSVA) was conducted and CIBERSORTx was used to investigate the relationship between HRG expression and immune cell infiltration. The Cancer Imaging Archive (TCIA) provided CT images that were used for prognostic analysis, radiomic feature extraction, and construction of the model, respectively. The HRG expression levels were predicted using the constructed and evaluated LR and SMV models.

RESULTS

HRG expression was shown to be substantially lower in BLCA tumors as opposed to that observed in normal tissues (p < 0.05). HRG expression had a close positive relationship with Eosinophils and a close negative relationship with B cells naive. The findings of the Landmark analysis illustrated that higher HRG was associated with improved patient survival at an early stage (P=0.048). The predictive performance of the two models, based on logistic regression analysis and support vector machine, was outstanding in the training and validation sets, yielding AUCs of 0.722 and 0.708, respectively, in the SVM model, and 0.727 and 0.662, respectively, in the LR.The models have good predictive efficiency.

CONCLUSION

HRG expression levels can have a significant impact on BLCA patients' prognoses. The radiomic characteristics can successfully predict the pre-surgical HRG expression levels, based on CT- Image omics.

摘要

背景

膀胱尿路上皮癌(BLCA)是泌尿系统中最常见的癌症。在癌症患者中,HRG融合与预后不良有关。通过影像组学预测BLCA中HRG表达尚未得到充分研究。

方法

主要利用来自癌症基因组图谱(TCGA)的数据确定BLCA和健康邻接组织中的HRG表达。使用Kaplan-Meier生存曲线和地标分析,研究HRG表达、临床病理参数和总生存期(OS)之间的关系。此外,进行基因集变异分析(GSVA)并使用CIBERSORTx研究HRG表达与免疫细胞浸润之间的关系。癌症影像存档(TCIA)提供的CT图像分别用于预后分析、影像组学特征提取和模型构建。使用构建并评估的逻辑回归(LR)和支持向量机(SMV)模型预测HRG表达水平。

结果

与正常组织相比,BLCA肿瘤中的HRG表达明显较低(p<0.05)。HRG表达与嗜酸性粒细胞呈密切正相关,与幼稚B细胞呈密切负相关。地标分析结果表明,较高的HRG与早期患者生存率提高相关(P=0.048)。基于逻辑回归分析和支持向量机的两个模型在训练集和验证集中的预测性能出色,支持向量机模型的AUC分别为0.722和0.708,逻辑回归模型的AUC分别为0.

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/337a/9884970/2fe8e8610b47/fonc-12-966506-g001.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验