凝结魏斯氏菌MB BCM9的基因组序列草图，一种稳定的产孢益生菌
Draft Genome Sequence of Weizmannia coagulans MB BCM9, a Stable Spore-Forming Probiotic.
作者信息
Kaushik Gaurav, Patel Mruduka
机构信息
Meteoric Biopharmaceuticals Pvt. Ltd, Ahmedabad, Gujarat, India.
出版信息
Microbiol Resour Announc. 2023 Mar 16;12(3):e0121222. doi: 10.1128/mra.01212-22. Epub 2023 Feb 2.
Abstract
Weizmannia coagulans MB BCM9 (MTCC 25157) is a safe probiotic strain. Here, we announce a fully assembled draft genome sequence consisting of 3,450,803 bp, with 139 contigs. A total of 3,377 protein-coding genes, 15 rRNAs, 80 tRNAs, 5 noncoding RNAs (ncRNAs), and 107 pseudogenes were identified from this assembly.
摘要
凝结魏斯氏菌MB BCM9（MTCC 25157）是一种安全的益生菌菌株。在此，我们公布了一个由3,450,803 bp组成、包含139个重叠群的完全组装草图基因组序列。从该组装序列中总共鉴定出3377个蛋白质编码基因、15个rRNA、80个tRNA、5个非编码RNA（ncRNA）和107个假基因。
相似文献
1
Draft Genome Sequence of Weizmannia coagulans MB BCM9, a Stable Spore-Forming Probiotic.凝结魏斯氏菌MB BCM9的基因组序列草图，一种稳定的产孢益生菌
Microbiol Resour Announc. 2023 Mar 16;12(3):e0121222. doi: 10.1128/mra.01212-22. Epub 2023 Feb 2.
2
In Vitro Evaluation of Strain LMG S-31876 Isolated from Fermented Rice for Potential Probiotic Properties, Safety Assessment and Technological Properties.从发酵大米中分离出的菌株LMG S-31876的潜在益生菌特性、安全性评估及工艺特性的体外评价
Life (Basel). 2022 Sep 6;12(9):1388. doi: 10.3390/life12091388.
3
Draft Genome Sequence of ATCC 9446, a Nonpathogenic Bacterium with Bioremediation and Industrial Potential.ATCC 9446的基因组序列草图，一种具有生物修复和工业潜力的非致病细菌。
Genome Announc. 2017 Jun 8;5(23):e00474-17. doi: 10.1128/genomeA.00474-17.
4
Complete Genome Sequencing Revealed the Potential Application of a Novel PL-W Production with Promising Bacteriocins in Food Preservative.全基因组测序揭示了一种新型PL-W生产在食品防腐剂中具有潜在应用前景，该生产可产生有前景的细菌素。
Foods. 2023 Jan 3;12(1):216. doi: 10.3390/foods12010216.
5
High-Quality Draft Genome Sequence and Characterization of ProBC Plus () LMG S-31876.ProBC Plus（）LMG S-31876的高质量基因组草图序列及特征分析
Microbiol Resour Announc. 2023 Jan 24;12(1):e0101822. doi: 10.1128/mra.01018-22. Epub 2022 Dec 6.
6
Draft Genome Sequence of Multidrug-Resistant Strain MBTC-1222, Isolated from Uziza (Piper guineense) Leaves in Nigeria.从尼日利亚的乌齐扎（几内亚胡椒）叶片中分离出的多药耐药菌株MBTC-1222的基因组序列草图
Genome Announc. 2018 Mar 1;6(9):e00123-18. doi: 10.1128/genomeA.00123-18.
7
Genome Sequence of Lactobacillus fermentum 47-7, a Good Probiotic Strain Isolated from a Healthy Thai Infant.从健康泰国婴儿分离出的优良益生菌菌株发酵乳杆菌47-7的基因组序列
Microbiol Resour Announc. 2019 Sep 26;8(39):e01014-19. doi: 10.1128/MRA.01014-19.
8
Draft Genome Sequence of the Spore-Forming Probiotic Strain Bacillus coagulans Unique IS-2.产芽孢益生菌凝结芽孢杆菌独特菌株IS-2的基因组序列草图
Genome Announc. 2016 Apr 21;4(2):e00225-16. doi: 10.1128/genomeA.00225-16.
9
Draft Genome Sequence of Leuconostoc mesenteroides P45 Isolated from Pulque, a Traditional Mexican Alcoholic Fermented Beverage.从墨西哥传统酒精发酵饮料龙舌兰酒中分离出的嗜柠檬酸明串珠菌P45的基因组序列草图
Genome Announc. 2014 Nov 6;2(6):e01130-14. doi: 10.1128/genomeA.01130-14.
10
Complete genome sequence of CACC834 isolated from canine.从犬类分离出的CACC834的全基因组序列
J Anim Sci Technol. 2021 Nov;63(6):1464-1467. doi: 10.5187/jast.2021.e108. Epub 2021 Nov 30.
引用本文的文献
1
A comprehensive review on probiotics and their use in aquaculture: Biological control, efficacy, and safety through the genomics and wet methods.益生菌及其在水产养殖中的应用综述：通过基因组学和湿法进行生物控制、功效及安全性研究
Heliyon. 2024 Dec 4;10(24):e40892. doi: 10.1016/j.heliyon.2024.e40892. eCollection 2024 Dec 30.
本文引用的文献
1
The efficacy and safety of Clostridium butyricum and Bacillus coagulans in Helicobacter pylori eradication treatment: An open-label, single-arm pilot study.丁酸梭菌和凝结芽孢杆菌在幽门螺杆菌根除治疗中的疗效和安全性：一项开放标签、单臂试点研究。
Medicine (Baltimore). 2020 Nov 6;99(45):e22976. doi: 10.1097/MD.0000000000022976.
2
TGS-GapCloser: A fast and accurate gap closer for large genomes with low coverage of error-prone long reads.TGS-GapCloser：一种快速准确的大型基因组缺口闭合方法，适用于错误倾向的长reads 覆盖率低的情况。
Gigascience. 2020 Sep 1;9(9). doi: 10.1093/gigascience/giaa094.
3
Spores of Bacillus coagulans GBI-30, 6086 show high germination, survival and enzyme activity in a dynamic, computer-controlled in vitro model of the gastrointestinal tract.凝结芽胞杆菌 GBI-30,6086 的孢子在动态、计算机控制的胃肠道体外模型中显示出高的发芽、存活和酶活性。
Benef Microbes. 2019 Feb 8;10(1):77-87. doi: 10.3920/BM2018.0037. Epub 2019 Jan 29.
4
Potential Use of in the Food Industry.在食品工业中的潜在用途。 （你提供的原文“Potential Use of in the Food Industry.”表述不完整，这里是按照正常语义补充完整后的翻译）
Foods. 2018 Jun 13;7(6):92. doi: 10.3390/foods7060092.
5
Expert consensus document. The International Scientific Association for Probiotics and Prebiotics consensus statement on the scope and appropriate use of the term probiotic.专家共识文件。国际益生菌和益生元科学协会关于益生菌术语的范围和适当使用的共识声明。
Nat Rev Gastroenterol Hepatol. 2014 Aug;11(8):506-14. doi: 10.1038/nrgastro.2014.66. Epub 2014 Jun 10.
6
Trimmomatic: a flexible trimmer for Illumina sequence data.Trimmomatic：一款适用于 Illumina 测序数据的灵活修剪工具。
Bioinformatics. 2014 Aug 1;30(15):2114-20. doi: 10.1093/bioinformatics/btu170. Epub 2014 Apr 1.
7
Using the Velvet de novo assembler for short-read sequencing technologies.将Velvet从头组装程序用于短读长测序技术。
Curr Protoc Bioinformatics. 2010 Sep;Chapter 11:Unit 11.5. doi: 10.1002/0471250953.bi1105s31.
8
A patented strain of Bacillus coagulans increased immune response to viral challenge.一种专利菌株凝结芽孢杆菌增强了对病毒攻击的免疫反应。
Postgrad Med. 2009 Mar;121(2):114-8. doi: 10.3810/pgm.2009.03.1971.
9
KAAS: an automatic genome annotation and pathway reconstruction server.KAAS：一个自动基因组注释和通路重建服务器。
Nucleic Acids Res. 2007 Jul;35(Web Server issue):W182-5. doi: 10.1093/nar/gkm321. Epub 2007 May 25.
Zotero 插件