Rutz Andreas, Das Chandan K, Fasano Andrea, Jaenecke Jan, Yadav Shanika, Apfel Ulf-Peter, Engelbrecht Vera, Fourmond Vincent, Léger Christophe, Schäfer Lars V, Happe Thomas
Photobiotechnology, Department of Plant Biochemistry, Ruhr-Universität Bochum, 44801 Bochum, Germany.
Theoretical Chemistry, Ruhr-Universität Bochum, 44801 Bochum, Germany.
ACS Catal. 2022 Dec 28;13(2):856-865. doi: 10.1021/acscatal.2c04031. eCollection 2023 Jan 20.
The high turnover rates of [FeFe]-hydrogenases under mild conditions and at low overpotentials provide a natural blueprint for the design of hydrogen catalysts. However, the unique active site (H-cluster) degrades upon contact with oxygen. The [FeFe]-hydrogenase from (CbA5H) is characterized by the flexibility of its protein structure, which allows a conserved cysteine to coordinate to the active site under oxidative conditions. Thereby, intrinsic cofactor degradation induced by dioxygen is minimized. However, the protection from O is only partial, and the activity of the enzyme decreases upon each exposure to O. By using site-directed mutagenesis in combination with electrochemistry, ATR-FTIR spectroscopy, and molecular dynamics simulations, we show that the kinetics of the conversion between the oxygen-protected inactive state (cysteine-bound) and the oxygen-sensitive active state can be accelerated by replacing a surface residue that is very distant from the active site. This sole exchange of methionine for a glutamate residue leads to an increased resistance of the hydrogenase to dioxygen. With our study, we aim to understand how local modifications of the protein structure can have a crucial impact on protein dynamics and how they can control the reactivity of inorganic active sites through outer sphere effects.
[FeFe]-氢化酶在温和条件下和低过电位下的高周转率为氢催化剂的设计提供了一个天然蓝图。然而,其独特的活性位点(H-簇)在与氧气接触时会降解。来自(CbA5H)的[FeFe]-氢化酶的特点是其蛋白质结构具有灵活性,这使得一个保守的半胱氨酸在氧化条件下能够与活性位点配位。由此,由双氧引起的内在辅因子降解被最小化。然而,对氧气的保护只是部分的,并且每次暴露于氧气后酶的活性都会降低。通过结合使用定点诱变与电化学、衰减全反射傅里叶变换红外光谱(ATR-FTIR)和分子动力学模拟,我们表明,通过替换一个与活性位点距离非常远的表面残基,可以加速氧保护的无活性状态(半胱氨酸结合)和氧敏感的活性状态之间转换的动力学。将甲硫氨酸单独替换为谷氨酸残基会导致氢化酶对双氧的抗性增加。通过我们的研究,我们旨在了解蛋白质结构的局部修饰如何对蛋白质动力学产生关键影响,以及它们如何通过外层效应控制无机活性位点的反应性。