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质膜蛋白-皮质肌动蛋白相互作用的多尺度成像与定量分析

Multiscale imaging and quantitative analysis of plasma membrane protein-cortical actin interplay.

作者信息

Dasgupta Aparajita, Ngo Huong-Tra, Tschoerner Deryl, Touret Nicolas, da Rocha-Azevedo Bruno, Jaqaman Khuloud

机构信息

Department of Biophysics, University of Texas Southwestern Medical Center; Dallas, TX, USA.

Department of Biochemistry, University of Alberta; Edmonton, AB, Canada.

出版信息

bioRxiv. 2023 Jan 23:2023.01.22.525112. doi: 10.1101/2023.01.22.525112.

Abstract

UNLABELLED

The spatiotemporal organization of cell surface receptors is important for cell signaling. Cortical actin (CA), the subset of the actin cytoskeleton subjacent to the plasma membrane (PM), plays a large role in cell surface receptor organization. This was however shown largely through actin perturbation experiments, which raise concerns of nonspecific effects and preclude quantification of actin architecture and dynamics under unperturbed conditions. These limitations make it challenging to predict how changes in CA properties can affect receptor organization. To derive direct relationships between the architecture and dynamics of CA and the spatiotemporal organization of PM proteins, including cell surface receptors, we developed a multiscale imaging and computational analysis framework based on the integration of single-molecule imaging (SMI) of PM proteins and fluorescent speckle microscopy (FSM) of CA (combined: SMI-FSM) in the same live cell. SMI-FSM revealed differential relationships between PM proteins and CA based on the PM proteins’ actin binding ability, diffusion type and local CA density. It also highlighted the complexity of cell wide actin perturbation, where we found that global changes in actin properties caused by perturbation were not necessarily reflected in the CA properties near PM proteins, and the changes in PM protein properties upon perturbation varied based on the local CA environment. Given the widespread use of SMI as a method to study the spatiotemporal organization of PM proteins and the versatility of SMI-FSM, we expect it to be widely applicable to enable future investigation of the influence of CA architecture and dynamics on different PM proteins, especially in the context of actin-dependent cellular processes, such as cell migration.

SIGNIFICANCE

Plasma membrane protein organization, an important factor for shaping cellular behaviors, is influenced by cortical actin, the subset of the actin cytoskeleton near the plasma membrane. Yet it is challenging to directly and quantitatively probe this influence. Here, we developed an imaging and analysis approach that combines single-molecule imaging, fluorescent speckle microscopy and computational statistical analysis to characterize and correlate the spatiotemporal organization of plasma membrane proteins and cortical actin. Our approach revealed different relationships between different proteins and cortical actin, and highlighted the complexity of interpreting cell wide actin perturbation experiments. We expect this approach to be widely used to study the influence of cortical actin on different plasma membrane components, especially in actin-dependent processes.

摘要

未标记

细胞表面受体的时空组织对于细胞信号传导很重要。皮质肌动蛋白(CA)是位于质膜(PM)下方的肌动蛋白细胞骨架的子集,在细胞表面受体组织中起很大作用。然而,这主要是通过肌动蛋白扰动实验证明的,这引发了对非特异性效应的担忧,并排除了在未受扰动条件下对肌动蛋白结构和动力学的量化。这些局限性使得预测CA特性的变化如何影响受体组织具有挑战性。为了得出CA的结构和动力学与PM蛋白(包括细胞表面受体)的时空组织之间的直接关系,我们基于同一活细胞中PM蛋白的单分子成像(SMI)和CA的荧光斑点显微镜(FSM)的整合,开发了一个多尺度成像和计算分析框架(组合:SMI-FSM)。SMI-FSM揭示了基于PM蛋白的肌动蛋白结合能力、扩散类型和局部CA密度,PM蛋白与CA之间的差异关系。它还突出了全细胞肌动蛋白扰动的复杂性,我们发现扰动引起的肌动蛋白特性的全局变化不一定反映在PM蛋白附近的CA特性中,并且扰动后PM蛋白特性的变化根据局部CA环境而变化。鉴于SMI作为研究PM蛋白时空组织的方法被广泛使用以及SMI-FSM的多功能性,我们预计它将被广泛应用,以便未来研究CA结构和动力学对不同PM蛋白的影响,特别是在肌动蛋白依赖性细胞过程(如细胞迁移)的背景下。

意义

质膜蛋白组织是塑造细胞行为的一个重要因素,受质膜附近肌动蛋白细胞骨架的子集皮质肌动蛋白影响。然而,直接和定量地探究这种影响具有挑战性。在这里,我们开发了一种成像和分析方法,该方法结合了单分子成像、荧光斑点显微镜和计算统计分析,以表征和关联质膜蛋白和皮质肌动蛋白的时空组织。我们的方法揭示了不同蛋白质与皮质肌动蛋白之间的不同关系,并突出了解释全细胞肌动蛋白扰动实验的复杂性。我们预计这种方法将被广泛用于研究皮质肌动蛋白对不同质膜成分的影响,特别是在肌动蛋白依赖性过程中。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ea4d/9900770/db9d7a8b0f43/nihpp-2023.01.22.525112v1-f0001.jpg

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