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ncRNA介导的P2RY14低表达与卵巢癌预后不良及肿瘤免疫浸润相关。

ncRNA-mediated low expression of P2RY14 correlates with poor prognosis and tumor immune infiltration in ovarian carcinoma.

作者信息

Shu Chenggan, Liu Lifen, Chen Xiaoping, Xue Jinling, Fei Jiahong, Wang Jianqing, Yang Xiaoyue, Peng Qi, Yuan Huaqin

机构信息

Department of Obstetrics and Gynecology, Yancheng First Hospital, Affiliated Hospital of Nanjing University Medical School & the First People's Hospital of Yancheng, Yancheng, China.

Department of Obstetrics and Gynecology, The Second Affiliated Hospital of Soochow University, Suzhou, China.

出版信息

Ann Transl Med. 2023 Jan 15;11(1):10. doi: 10.21037/atm-22-6120. Epub 2023 Jan 9.

Abstract

BACKGROUND

Ovarian cancer (OV) has been puzzling clinicians because of its poor prognosis. More and more evidence show that the G protein coupled receptor P2RY14 plays a key role in the initiation and progression of various types of human cancer. The purpose of our study is to explore the correlation between P2RY14 and the prognosis of ovarian cancer patients and the relevant mechanism.

METHODS

First, the differentially expressed gene P2RY14 was screened from The Cancer Genome Atlas (TCGA) database. Explored possible P2RY14 related miRNAs and lncRNAs through multiple public databases, predicted and analyzed the expression level of candidate miRNAs and candidate lncRNAs that can bind to candidate miRNAs in OV through StarBase database. The TIMER database was used to comprehensively analyze the expression of tumor infiltrating immune cells, and to analyze the correlation between the expression level of P2RY14 and the level of immune cell infiltration in OV or the expression level of immune checkpoints.

RESULTS

Patients with P2RY14 overexpression had better overall survival (OS) and progression-free interval (PFI). In the Targetscan database, 22 upstream miRNAs that may bind to P2RY14 were predicted. According to the regulatory network constructed by the Cytoscape software, correlation analysis and the role of miRNAs in the prognosis of OV, we first determined that the candidate miRNAs were miR-34c-5p. Then, we predicted the upstream lncRNAs of miR-34c-5p in the StarBase database, the expression level of these lncRNAs in OV in the Gene Expression Profiling Interactive Analysis (GEPIA) database, and the role in prognosis. We determined that LINC00665 is the most potential lncRNA upstream of ovarian cancer miRNA (hsa-miR-34c-5p)-P2RY14. Then, we analyzed the results in the Timer database, suggesting that P2RY14 expression was positively correlated with CD8T Cell, CD4T Cell, Macrophage, Neutral and Dendritic cells, and negatively correlated with B cells. Meanwhile, P2RY14 was positively correlated with CD274 and PDCD1.

CONCLUSIONS

P2RY14 can be used as a new predictive biomarker of ovarian cancer. Intervention of P2RY14 can affect the prognosis of ovarian cancer by affecting LINC00665-miR-34c-5p-P2RY14 axis. These findings provide a potential target for the development of anti-cancer strategies for ovarian cancer.

摘要

背景

卵巢癌(OV)因其预后较差一直困扰着临床医生。越来越多的证据表明,G蛋白偶联受体P2RY14在各类人类癌症的发生和发展中起关键作用。本研究的目的是探讨P2RY14与卵巢癌患者预后的相关性及相关机制。

方法

首先,从癌症基因组图谱(TCGA)数据库中筛选差异表达基因P2RY14。通过多个公共数据库探索可能与P2RY14相关的miRNA和lncRNA,利用StarBase数据库预测并分析卵巢癌中可与候选miRNA结合的候选miRNA和候选lncRNA的表达水平。使用TIMER数据库综合分析肿瘤浸润免疫细胞的表达情况,并分析P2RY14表达水平与卵巢癌中免疫细胞浸润水平或免疫检查点表达水平之间的相关性。

结果

P2RY14过表达的患者总生存期(OS)和无进展生存期(PFI)较好。在Targetscan数据库中,预测了22个可能与P2RY14结合的上游miRNA。根据Cytoscape软件构建的调控网络、相关性分析以及miRNA在卵巢癌预后中的作用,我们首先确定候选miRNA为miR-34c-5p。然后,我们在StarBase数据库中预测了miR-34c-5p的上游lncRNA,在基因表达谱交互分析(GEPIA)数据库中分析了这些lncRNA在卵巢癌中的表达水平及其在预后中的作用。我们确定LINC00665是卵巢癌miRNA(hsa-miR-34c-5p)-P2RY14上游最具潜力的lncRNA。然后,我们分析了Timer数据库中的结果,表明P2RY14表达与CD8T细胞、CD4T细胞、巨噬细胞、中性粒细胞和树突状细胞呈正相关,与B细胞呈负相关。同时,P2RY14与CD274和PDCD1呈正相关。

结论

P2RY14可作为卵巢癌新的预测生物标志物。干预P2RY14可通过影响LINC00665-miR-34c-5p-P2RY1轴影响卵巢癌的预后。这些发现为卵巢癌抗癌策略的开发提供了一个潜在靶点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7339/9906193/41d08a778ba1/atm-11-01-10-f1.jpg

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