Department of Physical Medicine & Rehabilitation, School of Medicine, University of Pittsburgh, PA 15261, USA.
Department of Human Genetics, School of Public Health, University of Pittsburgh, Pittsburgh, PA 15261, USA.
Neurosci Biobehav Rev. 2023 Apr;147:105078. doi: 10.1016/j.neubiorev.2023.105078. Epub 2023 Feb 9.
Epigenomic modifications of the brain-derived neurotrophic factor (BDNF) gene have been postulated to underlie the pathogenesis of neurodevelopmental, psychiatric, and neurological conditions. This systematic review summarizes current evidence investigating the association of BDNF epigenomic modifications (DNA methylation, non-coding RNA, histone modifications) with brain-related phenotypes in humans. A novel contribution is our creation of an open access web-based application, the BDNF DNA Methylation Map, to interactively visualize specific positions of CpG sites investigated across all studies for which relevant data were available. Our literature search of four databases through September 27, 2021 returned 1701 articles, of which 153 met inclusion criteria. Our review revealed exceptional heterogeneity in methodological approaches, hindering the identification of clear patterns of robust and/or replicated results. We summarize key findings and provide recommendations for future epigenomic research. The existing literature appears to remain in its infancy and requires additional rigorous research to fulfill its potential to explain BDNF-linked risk for brain-related conditions and improve our understanding of the molecular mechanisms underlying their pathogenesis.
脑源性神经营养因子(BDNF)基因的表观遗传修饰被认为是神经发育、精神和神经疾病发病机制的基础。本系统综述总结了目前关于 BDNF 表观遗传修饰(DNA 甲基化、非编码 RNA、组蛋白修饰)与人类与大脑相关表型之间关联的研究证据。一个新的贡献是我们创建了一个开放获取的基于网络的应用程序,即 BDNF DNA 甲基化图谱,以便在有相关数据的所有研究中,交互式地可视化研究中调查的 CpG 位点的特定位置。我们通过 2021 年 9 月 27 日对四个数据库的文献搜索,共返回 1701 篇文章,其中 153 篇符合纳入标准。我们的综述发现,研究方法存在很大的异质性,这阻碍了确定明确的、可靠的和/或复制结果模式。我们总结了关键发现,并为未来的表观遗传学研究提供了建议。现有文献似乎仍处于起步阶段,需要进一步进行严格的研究,以充分发挥其潜力,解释 BDNF 相关的与大脑相关疾病的风险,并增进我们对其发病机制的分子机制的理解。